RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 OR9A1PQ8NGU1 263 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 OR4C6Q8NH72 309 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 MDM1Q8TC05 714 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 EXT2Q93063 718 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 CAMK1GQ96NX5 476 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 PKP4Q99569 1192 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 HGH1Q9BTY7 390 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 MENTQ9BUN1 341 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 KIR3DX1Q9H7L2 352 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 CNOT10Q9H9A5 744 aaKnown RBP12.18□□□□□ -0.46
PDPN-210ENST00000513143 SEMA4GQ9NTN9 838 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 ARL15Q9NXU5 204 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 CD274Q9NZQ7 290 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 PCDHGB2Q9Y5G2 931 aa12.18□□□□□ -0.46
PDPN-210ENST00000513143 KRT87PA6NCN2 255 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 PABPN1LA6NDY0 278 aaKnown RBP12.17□□□□□ -0.46
PDPN-210ENST00000513143 TRIM38O00635 465 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 CDX4O14627 284 aaPredicted RBP12.17□□□□□ -0.46
PDPN-210ENST00000513143 DLX3O60479 287 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 SMIM24O75264 130 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 GUCA1CO95843 209 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 SLC16A8O95907 504 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 ANXA5P08758 320 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 ALPPL2P10696 532 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 TGM1P22735 817 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 ATP5F1P24539 256 aaPredicted RBP12.17□□□□□ -0.46
PDPN-210ENST00000513143 OAS2P29728 719 aaKnown RBP12.17□□□□□ -0.46
PDPN-210ENST00000513143 SERPINB4P48594 390 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 HNMTP50135 292 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 ALDH18A1P54886 795 aaKnown RBP12.17□□□□□ -0.46
PDPN-210ENST00000513143 MAZP56270 477 aaKnown RBP12.17□□□□□ -0.46
PDPN-210ENST00000513143 NFKB2Q00653 900 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 HHEXQ03014 270 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 PCLAFQ15004 111 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 SUZ12Q15022 739 aaKnown RBP12.17□□□□□ -0.46
PDPN-210ENST00000513143 C14orf28Q4W4Y0 310 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 HHATQ5VTY9 493 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 ZCCHC8Q6NZY4 707 aaKnown RBP12.17□□□□□ -0.46
PDPN-210ENST00000513143 MBOAT1Q6ZNC8 495 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 TCAIMQ8N3R3 496 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 ARL10Q8N8L6 244 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 FAM181AQ8N9Y4 354 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 RHBDF1Q96CC6 855 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 FBXL8Q96CD0 374 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 CCDC126Q96EE4 140 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 PARD6AQ9NPB6 346 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 OXSMQ9NWU1 459 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 SPATA7Q9P0W8 599 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 SIRPGQ9P1W8 387 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 PTBP2Q9UKA9 531 aaKnown RBP12.17□□□□□ -0.46
PDPN-210ENST00000513143 TDRKHQ9Y2W6 561 aaKnown RBP12.17□□□□□ -0.46
PDPN-210ENST00000513143 ASCC3Q8N3C0 2202 aaKnown RBP12.17□□□□□ -0.46
PDPN-210ENST00000513143 WDR87Q6ZQQ6 2873 aa12.17□□□□□ -0.46
PDPN-210ENST00000513143 NCF1BA6NI72 391 aaPredicted RBP12.16□□□□□ -0.46
PDPN-210ENST00000513143 A8MT66 165 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 NCF1CA8MVU1 366 aaPredicted RBP12.16□□□□□ -0.46
PDPN-210ENST00000513143 STX16-NPEPL1H3BU86 382 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 STX16O14662 325 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 PPM1DO15297 605 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 BIRC5O15392 142 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 TAPBPO15533 448 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 KDM1AO60341 852 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 IPO13O94829 963 aaKnown RBP12.16□□□□□ -0.46
PDPN-210ENST00000513143 S100BP04271 92 aaPredicted RBP12.16□□□□□ -0.46
PDPN-210ENST00000513143 BPGMP07738 259 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 ERGP11308 486 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 GFAPP14136 432 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 NCF1P14598 390 aaPredicted RBP12.16□□□□□ -0.46
PDPN-210ENST00000513143 CHN1P15882 459 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 IMPA1P29218 277 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 ALDH3A1P30838 453 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 GGT5P36269 586 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 HSD17B2P37059 387 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 PRKAA2P54646 552 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 SLC14A1Q13336 389 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 GPR18Q14330 331 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 ARHGAP19Q14CB8 494 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 SETDB1Q15047 1291 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 PFKFB4Q16877 469 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 ZXDCQ2QGD7 858 aaPredicted RBP12.16□□□□□ -0.46
PDPN-210ENST00000513143 TMEM26Q6ZUK4 368 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 SLC22A9Q8IVM8 553 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 C10orf107Q8IVU9 208 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 SLC35F3Q8IY50 421 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 FBXO39Q8N4B4 442 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 KYQ8NBH2 561 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 OR52E1Q8NGJ3 308 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 FAM76AQ8TAV0 307 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 MGARPQ8TDB4 240 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 ATL1Q8WXF7 558 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 PHF21BQ96EK2 531 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 EGFL8Q99944 293 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 PAIP2Q9BPZ3 127 aaKnown RBP12.16□□□□□ -0.46
PDPN-210ENST00000513143 EDEM2Q9BV94 578 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 RAB11FIP5Q9BXF6 653 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 STN1Q9H668 368 aaKnown RBP12.16□□□□□ -0.46
PDPN-210ENST00000513143 UCK1Q9HA47 277 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 MLXIPLQ9NP71 852 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 RXFP3Q9NSD7 469 aa12.16□□□□□ -0.46
PDPN-210ENST00000513143 STOX2Q9P2F5 926 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms