RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 CCDC68Q9H2F9 335 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 L2HGDHQ9H9P8 463 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 MRM3Q9HC36 420 aaKnown RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 XAB2Q9HCS7 855 aaKnown RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 C1GALT1Q9NS00 363 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 C20orf96Q9NUD7 363 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 SPHK1Q9NYA1 384 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 CDC23Q9UJX2 597 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 PADI1Q9ULC6 663 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 SOX13Q9UN79 622 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 HEMK1Q9Y5R4 338 aaPredicted RBP6.3□□□□□ -1.4
KDM3B-208ENST00000512928 MRFAP1Q9Y605 127 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 TENM4Q6N022 2769 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 PIEZO2Q9H5I5 2752 aa6.3□□□□□ -1.4
KDM3B-208ENST00000512928 PIKFYVEQ9Y2I7 2098 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 MAGEB16A2A368 324 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 KRT87PA6NCN2 255 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 E7EQ34 232 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 CCDC188H7C350 402 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 KPNA5O15131 536 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 KLK3P07288 261 aaPredicted RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 F8A1P23610 371 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 ARNTP27540 789 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 AOAHP28039 575 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 OAS2P29728 719 aaKnown RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 PTGIRP43119 386 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 BDKRB1P46663 353 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 RAB28P51157 221 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 ITGA1P56199 1179 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 POLE2P56282 527 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 RPS18P62269 152 aaKnown RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 RPS15P62841 145 aaKnown RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 CTBP1Q13363 440 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 DNASE1L3Q13609 305 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 MAP7Q14244 749 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 SF1Q15637 639 aaKnown RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 LINC00303Q3SY05 128 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 CTSL3PQ5NE16 218 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 PRAMEF17Q5VTA0 474 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 KIAA0930Q6ICG6 404 aaPredicted RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 NEPROQ6NW34 567 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 UNC5DQ6UXZ4 953 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 SYT10Q6XYQ8 523 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 CDHR3Q6ZTQ4 885 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 CAND1Q86VP6 1230 aaKnown RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 BPHLQ86WA6 291 aaPredicted RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 DCUN1D3Q8IWE4 304 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 FAM20CQ8IXL6 584 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 PPIL6Q8IXY8 311 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 GPR135Q8IZ08 494 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 CARFQ8N187 725 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 ZBTB2Q8N680 514 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 EXD3Q8N9H8 876 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 C19orf47Q8N9M1 422 aaKnown RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 LMNTD1Q8N9Z9 388 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 OR8K5Q8NH50 307 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 OR1L3Q8NH93 324 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 ZNF501Q96CX3 271 aaPredicted RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 WBP1Q96G27 269 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 TCTN2Q96GX1 697 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 CATSPER2Q96P56 530 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 IL17FQ96PD4 163 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 TRAPPC9Q96Q05 1148 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 SPRY4Q9C004 299 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 P2RY12Q9H244 342 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 ACTL8Q9H568 366 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 ACTR5Q9H9F9 607 aaPredicted RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 PPANQ9NQ55 473 aaKnown RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 LHX9Q9NQ69 397 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 FBXO6Q9NRD1 293 aaPredicted RBP6.29□□□□□ -1.4
KDM3B-208ENST00000512928 ABCF3Q9NUQ8 709 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 OR6C2Q9NZP2 312 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 SERTAD3Q9UJW9 196 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 KCND3Q9UK17 655 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 BTRCQ9Y297 605 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 VPS9D1Q9Y2B5 631 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 KLHL20Q9Y2M5 609 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 NFS1Q9Y697 457 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 ZNF462Q96JM2 2506 aa6.29□□□□□ -1.4
KDM3B-208ENST00000512928 ASH1LQ9NR48 2969 aaKnown RBP6.28□□□□□ -1.4
KDM3B-208ENST00000512928 A0A0J9YY10 115 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 FAM237BA0A1B0GVD1 139 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 ESPNB1AK53 854 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 C21orf140B9A014 251 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 H3BMM5 538 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 ZNF749O43361 778 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 SLC28A2O43868 658 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 GPC4O75487 556 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 BANF1O75531 89 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 OR2B3O76000 313 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 USP1O94782 785 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 SLCO2B1O94956 709 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 SYF2O95926 243 aaKnown RBP6.28□□□□□ -1.4
KDM3B-208ENST00000512928 ESR1P03372 595 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 TPBGLP0DKB5 382 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 SFTPCP11686 197 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 MLNP12872 115 aa6.28□□□□□ -1.4
KDM3B-208ENST00000512928 PKMP14618 531 aaKnown RBP6.28□□□□□ -1.4
KDM3B-208ENST00000512928 PGAM1P18669 254 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms