RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ZNF768Q9H5H4 540 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 KIR3DX1Q9H7L2 352 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 GPN2Q9H9Y4 310 aaPredicted RBP8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 APMAPQ9HDC9 416 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 PDE7BQ9NP56 450 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 FAM114A2Q9NRY5 505 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 SLC24A2Q9UI40 661 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 ANKRD12Q6UB98 2062 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 IGSF10Q6WRI0 2623 aa8.5□□□□□ -1.05
PDLIM5-213ENST00000509357 OR5K3A6NET4 321 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 TK2O00142 265 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 PRMT5O14744 637 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 MAP3K7O43318 606 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 SLU7O95391 586 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 TTC4O95801 387 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 GSTM1P09488 218 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 CCNYL3P0C7X3 344 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 POLR2CP19387 275 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 TNFRSF8P28908 595 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 TTPAP49638 278 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 ADARP55265 1226 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 CYP4F2P78329 520 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 GSTM4Q03013 218 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 CAV1Q03135 178 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 MGAT5Q09328 741 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 PRKG2Q13237 762 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 CUL1Q13616 776 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 COL9A2Q14055 689 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 BOP1Q14137 746 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 IL11RAQ14626 422 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 KBTBD12Q3ZCT8 623 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 CCSMST1Q4G0I0 132 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 ACSBG2Q5FVE4 666 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 AARS2Q5JTZ9 985 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 TMTC4Q5T4D3 741 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 CERS6Q6ZMG9 384 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 PRSS42Q7Z5A4 293 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 ZC3HC1Q86WB0 502 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 PPP1R3BQ86XI6 285 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 CEP97Q8IW35 865 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 ESX1Q8N693 406 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 PHC3Q8NDX5 983 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 UHMK1Q8TAS1 419 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 CD200R1Q8TD46 325 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 FBF1Q8TES7 1133 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 PYROXD1Q8WU10 500 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 TFGQ92734 400 aaPredicted RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 DLG3Q92796 817 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 FMO2Q99518 471 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 EFHD1Q9BUP0 239 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 TSSK1BQ9BXA7 367 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 TWSG1Q9GZX9 223 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 RAB33BQ9H082 229 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 TRIT1Q9H3H1 467 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 SOHLH2Q9NX45 425 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 EPHA6Q9UF33 1036 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 CIDEBQ9UHD4 219 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 LNPEPQ9UIQ6 1025 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 TSR3Q9UJK0 312 aaKnown RBP8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 PILRAQ9UKJ1 303 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 RARRES3Q9UL19 164 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 SSUH2Q9Y2M2 353 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 PCDHGA4Q9Y5G9 962 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 NFS1Q9Y697 457 aa8.49□□□□□ -1.05
PDLIM5-213ENST00000509357 ATRXP46100 2492 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 SMG1Q96Q15 3661 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 MGAQ8IWI9 3026 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 IGHV5-51A0A0C4DH38 117 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 TLCD2A6NGC4 264 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 LIN7AO14910 233 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 NDUFS3O75489 264 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 KIAA0754O94854 1291 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 ACSL3O95573 720 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 TSPAN12O95859 305 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 PKMP14618 531 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 LIFP15018 202 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 NELFEP18615 380 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 PAMP19021 973 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 CDH3P22223 829 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 CD151P48509 253 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 HSD11B2P80365 405 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 ACY1Q03154 408 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 RPA4Q13156 261 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 TUBB3Q13509 450 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 LY6DQ14210 128 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 KCNAB1Q14722 419 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 ZXDCQ2QGD7 858 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 MRNIPQ6NTE8 343 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 C6orf15Q6UXA7 325 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 CYHR1Q6ZMK1 362 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 C3orf62Q6ZUJ4 267 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 GALNT7Q86SF2 657 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 GALNT6Q8NCL4 622 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 SNRNP27Q8WVK2 155 aaKnown RBP8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 KLHL6Q8WZ60 621 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 EXTL1Q92935 676 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 WBP1Q96G27 269 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 CD180Q99467 661 aa8.48□□□□□ -1.05
PDLIM5-213ENST00000509357 GPR21Q99679 349 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms