RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 GABRB3P28472 473 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 RAB28P51157 221 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 CLCN7P51798 805 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 ITGA8P53708 1063 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 MRPS25P82663 173 aaKnown RBP15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 TUBB3Q13509 450 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 ACSBG2Q5FVE4 666 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 CYB5D1Q6P9G0 228 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 SPESP1Q6UW49 350 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 CYHR1Q6ZMK1 362 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 SPNS2Q8IVW8 549 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 PDIK1LQ8N165 341 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 ESX1Q8N693 406 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 LINC01555Q8NAE3 123 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 OR8K5Q8NH50 307 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 CALML6Q8TD86 181 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 RAD51AP1Q96B01 352 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 FAM136AQ96C01 138 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 SLC45A3Q96JT2 553 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 SLC30A3Q99726 388 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 KLHL25Q9H0H3 589 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 FAM60AQ9NP50 221 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 IARS2Q9NSE4 1012 aaKnown RBP15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 IL17BQ9UHF5 180 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 PADI1Q9ULC6 663 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 SNX24Q9Y343 169 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 TEX264Q9Y6I9 313 aa15.6■□□□□ 0.09
PDLIM5-212ENST00000509333 PIEZO2Q9H5I5 2752 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 ATRXP46100 2492 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 TK2O00142 265 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 TERTO14746 1132 aaKnown RBP15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 PRICKLE3O43900 615 aaPredicted RBP15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 KDM1AO60341 852 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 SEC31AO94979 1220 aaKnown RBP15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 RPN2P04844 631 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 MSL3P1P0C860 447 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 F8A1P23610 371 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 ATP5DP30049 168 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 PEBP1P30086 187 aaKnown RBP15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 PKLRP30613 574 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 ELK3P41970 407 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 SLC1A2P43004 574 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 CYP4F2P78329 520 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 MPP1Q00013 466 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 TIAL1Q01085 375 aaKnown RBP eCLIP15.59■□□□□ 0.094e-8■■■■□ 22.5
PDLIM5-212ENST00000509333 CRYMQ14894 314 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 KIR2DS3Q14952 304 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 ZIC1Q15915 447 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 LINC00303Q3SY05 128 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 CCSMST1Q4G0I0 132 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 SPANXN3Q5MJ09 141 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 HP1BP3Q5SSJ5 553 aaPredicted RBP15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 CNSTQ6PJW8 725 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 DCUN1D3Q8IWE4 304 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 C2orf73Q8N5S3 287 aaPredicted RBP15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 ZBTB2Q8N680 514 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 ZSCAN1Q8NBB4 408 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 SLC38A9Q8NBW4 561 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 C2CD4AQ8NCU7 369 aaPredicted RBP15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 GSDMBQ8TAX9 411 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 INPP5DQ92835 1189 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 SNF8Q96H20 258 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 IL17FQ96PD4 163 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 CHRNA10Q9GZZ6 450 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 CIDEBQ9UHD4 219 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 DHRS7Q9Y394 339 aa15.59■□□□□ 0.09
PDLIM5-212ENST00000509333 EFCAB8A8MWE9 144 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 ISM1B1AKI9 464 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 ERVH48-1M5A8F1 160 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 NKX2-8O15522 239 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 AHSGP02765 367 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 MT-ND3P03897 115 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 CCNYL3P0C7X3 344 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 STAT5AP42229 794 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 RPL21P46778 160 aaKnown RBP15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 GABRA4P48169 554 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 KLHL38Q2WGJ6 581 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 PRAMEF17Q5VTA0 474 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 TTC23LQ6PF05 361 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 CDHR3Q6ZTQ4 885 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 TRIM73Q86UV7 250 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 KCNMB4Q86W47 210 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 OR2L8Q8NGY9 312 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 OR1L3Q8NH93 324 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 SLC39A7Q92504 469 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 LRRC39Q96DD0 335 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 TCTN2Q96GX1 697 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 FOPNLQ96NB1 174 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 WDR83Q9BRX9 315 aaKnown RBP15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 ERP44Q9BS26 406 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 EFHD1Q9BUP0 239 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 TRIM31Q9BZY9 425 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 GPN2Q9H9Y4 310 aaPredicted RBP15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 SOHLH2Q9NX45 425 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 LNPEPQ9UIQ6 1025 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 SERTAD3Q9UJW9 196 aa15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 RUVBL2Q9Y230 463 aaKnown RBP15.58■□□□□ 0.08
PDLIM5-212ENST00000509333 FAM187AA6NFU0 413 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 RASGRF2O14827 1237 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 MAP3K7O43318 606 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms