RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 C1QTNF3Q9BXJ4 246 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 TRIM54Q9BYV2 358 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 VPS11Q9H270 941 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 FAM86C1Q9NVL1 165 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 EVA1BQ9NVM1 165 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 NUDT4Q9NZJ9 180 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 OR6C2Q9NZP2 312 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 EMCNQ9ULC0 261 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 DOLKQ9UPQ8 538 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 RUVBL2Q9Y230 463 aaKnown RBP8.4□□□□□ -1.06
USP46-207ENST00000508499 PDE10AQ9Y233 779 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 ASF1AQ9Y294 204 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 U3KQA8 63 aa8.4□□□□□ -1.06
USP46-207ENST00000508499 OR52A4PA6NMU1 304 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 ZNF839A8K0R7 811 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 STX16-NPEPL1H3BU86 382 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 CDC7O00311 574 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 MATN2O00339 956 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 TRIM38O00635 465 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 STX16O14662 325 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 FFAR2O15552 330 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 ZW10O43264 779 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 SDC3O75056 442 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 CBFA2T3O75081 653 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 PROCP04070 461 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 HIST1H2AGP0C0S8 130 aaPredicted RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 SBK3P0C264 359 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 TPBGLP0DKB5 382 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 HIST1H2ADP20671 130 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 CCND1P24385 295 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 ACP1P24666 158 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 MAP4P27816 1152 aaKnown RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 SHMT2P34897 504 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 KCNC1P48547 511 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 RAB28P51157 221 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 DUSP3P51452 185 aaPredicted RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 PGGT1BP53609 377 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 ALDH18A1P54886 795 aaKnown RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 MAGOHP61326 146 aaKnown RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 GPLD1P80108 840 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 SF3A2Q15428 464 aaKnown RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 OR4D1Q15615 310 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 TSNQ15631 228 aaKnown RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 PHKG1Q16816 387 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 TTMPQ5BVD1 217 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 SULT1C3Q6IMI6 304 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 NAPRTQ6XQN6 538 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 TMEM26Q6ZUK4 368 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 GLRX5Q86SX6 157 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 PIP4P1Q86T03 277 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 SLC22A9Q8IVM8 553 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 SLC35F3Q8IY50 421 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 LRRC56Q8IYG6 542 aaPredicted RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 CARFQ8N187 725 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 RAB42Q8N4Z0 105 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 OR9A1PQ8NGU1 263 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 ARL8AQ96BM9 186 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 RHBDF1Q96CC6 855 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 FBXL8Q96CD0 374 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 CXorf40BQ96DE9 158 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 HIST1H2AHQ96KK5 128 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 APOLD1Q96LR9 279 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 CAMK1GQ96NX5 476 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 HIST1H2AJQ99878 128 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 H2AFJQ9BTM1 129 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 GTPBP2Q9BX10 602 aaKnown RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 IQCGQ9H095 443 aaKnown RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 TMEM216Q9P0N5 145 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 EPHA6Q9UF33 1036 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 PTBP2Q9UKA9 531 aaKnown RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 ADAMTS6Q9UKP5 1117 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 IKZF3Q9UKT9 509 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 PSMD13Q9UNM6 376 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 WDR87Q6ZQQ6 2873 aa8.39□□□□□ -1.07
USP46-207ENST00000508499 SNRNP200O75643 2136 aaKnown RBP8.39□□□□□ -1.07
USP46-207ENST00000508499 HEATR5BQ9P2D3 2071 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 NPEPPSL1A6NEC2 478 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 G3V2L1 256 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 GOLGA8RI6L899 631 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 BIRC5O15392 142 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 SIGLEC6O43699 453 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 SNX2O60749 519 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 SNUPNO95149 360 aaKnown RBP8.38□□□□□ -1.07
USP46-207ENST00000508499 VIPP01282 170 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 ANXA5P08758 320 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 CDK4P11802 303 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 CREB1P16220 341 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 PKLRP30613 574 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 SLC6A12P48065 614 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 PRKAA2P54646 552 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 DNAJB13P59910 316 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 ABRQ12979 859 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 ILKQ13418 452 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 E2F2Q14209 437 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 GPR18Q14330 331 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 SETDB1Q15047 1291 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 SEPT7Q16181 437 aaKnown RBP8.38□□□□□ -1.07
USP46-207ENST00000508499 CCDC6Q16204 474 aa8.38□□□□□ -1.07
USP46-207ENST00000508499 DEFB133Q30KQ1 61 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms