RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 CSF2P04141 144 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 PIK3CBP42338 1070 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 TAF13Q15543 124 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 NDUFA9Q16795 377 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 PDE12Q6L8Q7 609 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 ESRP1Q6NXG1 681 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 INTS5Q6P9B9 1019 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 UBE2R2Q712K3 238 aaPredicted RBP7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 OTOP3Q7RTS5 596 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 DAW1Q8N136 415 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 ZBTB2Q8N680 514 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 OR8J3Q8NGG0 315 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 GEMIN6Q8WXD5 167 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 MRPS31Q92665 395 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 DHRS1Q96LJ7 313 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF597Q96LX8 424 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 CAMK1GQ96NX5 476 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 TCEAL7Q9BRU2 100 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 LMAN2LQ9H0V9 348 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 PPIL3Q9H2H8 161 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 AMBNQ9NP70 447 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 XPNPEP1Q9NQW7 623 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 THUMPD1Q9NXG2 353 aaKnown RBP7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 SRRDQ9UH36 339 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF639Q9UID6 485 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 ENPP5Q9UJA9 477 aa7.18□□□□□ -1.26
UBE2D3-224ENST00000508474 BHMG1C9JSJ3 638 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 PRODHO43272 600 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 HCN1O60741 890 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ARL6IP5O75915 188 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 NDST3O95803 873 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 TGM6O95932 706 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 RYKP34925 604 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 SKP1P63208 163 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 CACNG1Q06432 222 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 SLC13A2Q13183 592 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 AGAP7PQ5VUJ5 663 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 AGAP6Q5VW22 663 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 LRRC66Q68CR7 880 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 LCN8Q6JVE9 175 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ULK3Q6PHR2 472 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 LRRN1Q6UXK5 716 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 PHACTR4Q8IZ21 702 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF557Q8N988 423 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 OR5J2Q8NH18 312 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 COQ8AQ8NI60 647 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 MYO19Q96H55 970 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 SENP8Q96LD8 212 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 AGAP4Q96P64 663 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 FAM129BQ96TA1 746 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 OXCT2Q9BYC2 517 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 GPN2Q9H9Y4 310 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 SGK2Q9HBY8 427 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 AAASQ9NRG9 546 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 DTLQ9NZJ0 730 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 MARCH2Q9P0N8 246 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 PPIEQ9UNP9 301 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 EXOSC1Q9Y3B2 195 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 PXDNQ92626 1479 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 CARNS1A5YM72 827 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 LRRN3E7EW58 273 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 SOCS2O14508 198 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 AQP9O43315 295 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 PRKYO43930 277 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 CAPN15O75808 1086 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 APOC3P02656 99 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 PRH1P02810 166 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ANXA4P09525 319 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 CD247P20963 164 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 L1CAMP32004 1257 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 GRIK2Q13002 908 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 NFE2L1Q14494 772 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 PARP15Q460N3 678 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 MEDAGQ5VYS4 303 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF782Q6ZMW2 699 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 C15orf52Q6ZUT6 534 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 DPCDQ9BVM2 203 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 LHPPQ9H008 270 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 LRRN3Q9H3W5 708 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 AGO3Q9H9G7 860 aaKnown RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 C14orf119Q9NWQ9 140 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 FAM118AQ9NWS6 357 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 MARK1Q9P0L2 795 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ERVK-18Q9QC07 812 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 SPEF2Q9C093 1822 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 DAPL1A0PJW8 107 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 SLC1A7O00341 560 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 BCAS1O75363 584 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ESR1P03372 595 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 HSD17B1P14061 328 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 POU2F1P14859 743 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ZNF14P17017 642 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 PVALBP20472 110 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 PRPS1L1P21108 318 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 NR4A2P43354 598 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 CBX5P45973 191 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 AP2S1P53680 142 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 LAPTM5Q13571 262 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 GRIK4Q16099 956 aa7.17□□□□□ -1.26
UBE2D3-224ENST00000508474 ZC3HC1Q86WB0 502 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms