RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 NIPSNAP2O75323 286 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 ENO3P13929 434 aaPredicted RBP19.23■□□□□ 0.67
SFXN1-209ENST00000508290 UGT2B7P16662 529 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 CD9P21926 228 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 ABRQ12979 859 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 KCNAB1Q14722 419 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 HIF1AQ16665 826 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 KCTD19Q17RG1 926 aaPredicted RBP19.23■□□□□ 0.67
SFXN1-209ENST00000508290 LRRC8EQ6NSJ5 796 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 HIBCHQ6NVY1 386 aaPredicted RBP19.23■□□□□ 0.67
SFXN1-209ENST00000508290 KCNMB4Q86W47 210 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 OR2L8Q8NGY9 312 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 INTS7Q9NVH2 962 aaKnown RBP19.23■□□□□ 0.67
SFXN1-209ENST00000508290 SERTAD3Q9UJW9 196 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 RALYQ9UKM9 306 aaKnown RBP19.23■□□□□ 0.67
SFXN1-209ENST00000508290 FBXO5Q9UKT4 447 aa19.23■□□□□ 0.67
SFXN1-209ENST00000508290 FAM187AA6NFU0 413 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 TTI1O43156 1089 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 SCRG1O75711 98 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 SEC31AO94979 1220 aaKnown RBP19.22■□□□□ 0.67
SFXN1-209ENST00000508290 MATN4O95460 622 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 RECKO95980 971 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 CBSLP0DN79 551 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 ST6GAL1P15907 406 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 CBSP35520 551 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 SLC1A2P43004 574 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 ARL4CP56559 192 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 DHX9Q08211 1270 aaKnown RBP19.22■□□□□ 0.67
SFXN1-209ENST00000508290 NAA25Q14CX7 972 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 HSP90AA5PQ58FG0 334 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 PWWP2BQ6NUJ5 590 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 GALNT7Q86SF2 657 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 TMEM126BQ8IUX1 230 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 AGGF1Q8N302 714 aaeCLIP19.22■□□□□ 0.679e-7■■■□□ 14.8
SFXN1-209ENST00000508290 C19orf47Q8N9M1 422 aaKnown RBP19.22■□□□□ 0.67
SFXN1-209ENST00000508290 CFAP61Q8NHU2 1237 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 HMGCLL1Q8TB92 370 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 TTC9Q92623 222 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 ELMO2Q96JJ3 720 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 OR2A14Q96R47 310 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 TRIM56Q9BRZ2 755 aaKnown RBP19.22■□□□□ 0.67
SFXN1-209ENST00000508290 SLC12A9Q9BXP2 914 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 SPATA7Q9P0W8 599 aa19.22■□□□□ 0.67
SFXN1-209ENST00000508290 EFCAB8A8MWE9 144 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 ISM1B1AKI9 464 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 C1orf105O95561 183 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 HBQ1P09105 142 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 TPBGLP0DKB5 382 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 SFTPCP11686 197 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 ZNF28P17035 718 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 HSD17B2P37059 387 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 ILF2Q12905 390 aaKnown RBP19.21■□□□□ 0.67
SFXN1-209ENST00000508290 CBLBQ13191 982 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 CTBP1Q13363 440 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 FRG1Q14331 258 aaKnown RBP19.21■□□□□ 0.67
SFXN1-209ENST00000508290 BBS9Q3SYG4 887 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 UGT3A1Q6NUS8 523 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 DENND6AQ8IWF6 608 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 CNTN4Q8IWV2 1026 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 GALNT6Q8NCL4 622 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 SPATA4Q8NEY3 305 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 SLC39A7Q92504 469 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 MENTQ9BUN1 341 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 GPR87Q9BY21 358 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 PCDHGA6Q9Y5G7 932 aa19.21■□□□□ 0.67
SFXN1-209ENST00000508290 LOC101059948A0A1B0GTJ6 334 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 ZNF839A8K0R7 811 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 FANCGO15287 622 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 VPS26AO75436 327 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 CATP04040 527 aaKnown RBP19.2■□□□□ 0.66
SFXN1-209ENST00000508290 KLK3P07288 261 aaPredicted RBP19.2■□□□□ 0.66
SFXN1-209ENST00000508290 SKIV2L2P42285 1042 aaKnown RBP19.2■□□□□ 0.66
SFXN1-209ENST00000508290 CLCN7P51798 805 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 ITGA1P56199 1179 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 GRB7Q14451 532 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 ARHGAP19Q14CB8 494 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 GPR19Q15760 415 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 GPR135Q8IZ08 494 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 C2CD4AQ8NCU7 369 aaPredicted RBP19.2■□□□□ 0.66
SFXN1-209ENST00000508290 N4BP2L2Q92802 583 aaPredicted RBP19.2■□□□□ 0.66
SFXN1-209ENST00000508290 CERS2Q96G23 380 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 PPM1MQ96MI6 270 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 KRT12Q99456 494 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 DPH2Q9BQC3 489 aaPredicted RBP19.2■□□□□ 0.66
SFXN1-209ENST00000508290 LHX9Q9NQ69 397 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 FBXO6Q9NRD1 293 aaPredicted RBP19.2■□□□□ 0.66
SFXN1-209ENST00000508290 IL1RAPL1Q9NZN1 696 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 ZC3H7BQ9UGR2 993 aaKnown RBP19.2■□□□□ 0.66
SFXN1-209ENST00000508290 CORO1CQ9ULV4 474 aaPredicted RBP19.2■□□□□ 0.66
SFXN1-209ENST00000508290 AP1M2Q9Y6Q5 423 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 CACNA1GO43497 2377 aa19.2■□□□□ 0.66
SFXN1-209ENST00000508290 CYP2A7P20853 494 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 DLSTP36957 453 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 ITGA8P53708 1063 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 CALCOCO2Q13137 446 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 SRSF6Q13247 344 aaKnown RBP19.19■□□□□ 0.66
SFXN1-209ENST00000508290 KIAA1614Q5VZ46 1190 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 FBXO38Q6PIJ6 1188 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 CNSTQ6PJW8 725 aa19.19■□□□□ 0.66
SFXN1-209ENST00000508290 LINC01555Q8NAE3 123 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms