RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 CCDC88CQ9P219 2028 aa7.73□□□□□ -1.17
UBE2D3-222ENST00000508238 BSNQ9UPA5 3926 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 HIVEP3Q5T1R4 2406 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 ESPL1Q14674 2120 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 UBA6A0AVT1 1052 aaPredicted RBP7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 CCDC162PA2VCL2 907 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 C21orf140B9A014 251 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 J3QKU1 62 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 IFRD1O00458 451 aaPredicted RBP7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 LIN7AO14910 233 aaPredicted RBP7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 SMNDC1O75940 238 aaKnown RBP eCLIP7.72□□□□□ -1.173e-7■■□□□ 11.4
UBE2D3-222ENST00000508238 KIAA0754O94854 1291 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 IFNB1P01574 187 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 ALBP02768 609 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 FTH1P02794 183 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 CCDC175P0C221 793 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 F8A1P23610 371 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 MSNP26038 577 aaKnown RBP7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 ACADLP28330 430 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 PDHA2P29803 388 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 FOXN2P32314 431 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 GRIA1P42261 906 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 KPNA2P52292 529 aaKnown RBP7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 CDC20Q12834 499 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 PRKAA1Q13131 559 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 TUBB3Q13509 450 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 BOP1Q14137 746 aaKnown RBP7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 SEPT6Q14141 434 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 KRT33BQ14525 404 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 TMTC4Q5T4D3 741 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 TSTD2Q5T7W7 516 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 PWWP2BQ6NUJ5 590 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 ARMC6Q6NXE6 501 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 DUS1LQ6P1R4 473 aaKnown RBP7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 C20orf204Q6ZNR8 217 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 C8orf86Q6ZUL3 223 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 RASGRP3Q8IV61 690 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 LRRC8AQ8IWT6 810 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 UNC5BQ8IZJ1 945 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 DNAAF3Q8N9W5 541 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 SIDT2Q8NBJ9 832 aaKnown RBP7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 OR4E2Q8NGC2 313 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 APOBEC4Q8WW27 367 aaKnown RBP7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 LCN9Q8WX39 176 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 STARD8Q92502 1023 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 TFGQ92734 400 aaPredicted RBP7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 HDAC10Q969S8 669 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 LRFN5Q96NI6 719 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 TTC1Q99614 292 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 TLR10Q9BXR5 811 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 GPR87Q9BY21 358 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 CHRNA10Q9GZZ6 450 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 SLC25A18Q9H1K4 315 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 SRMSQ9H3Y6 488 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 LIN7BQ9HAP6 207 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 EIF2B3Q9NR50 452 aaKnown RBP7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 HOMER3Q9NSC5 361 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 PIH1D1Q9NWS0 290 aaKnown RBP7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 SMARCAL1Q9NZC9 954 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 PAK5Q9P286 719 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 HEATR5BQ9P2D3 2071 aa7.72□□□□□ -1.17
UBE2D3-222ENST00000508238 NOTCH2Q04721 2471 aa7.71□□□□□ -1.17
UBE2D3-222ENST00000508238 SLC5A10A0PJK1 596 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 E7EVH7 732 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 F8W8V4 182 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 M0R082 166 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 AP3B1O00203 1094 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 BTN3A3O00478 584 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 SUV39H1O43463 412 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 TIAF1O95411 115 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 APRTP07741 180 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 EBLN1P0CF75 366 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 PRSS56P0CW18 603 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 TCN2P20062 427 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 OAS2P29728 719 aaKnown RBP7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 PRDX3P30048 256 aaKnown RBP7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 RPL22P35268 128 aaKnown RBP7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 DLSTP36957 453 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 PPARGP37231 505 aaPredicted RBP7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 ARL4DP49703 201 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 POLE2P56282 527 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 CDK16Q00536 496 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 NFATC3Q12968 1075 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 KCNAB1Q14722 419 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 CCDC38Q502W7 563 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 ARMC3Q5W041 872 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 AFTPHQ6ULP2 937 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 NXPE4Q6UWF7 544 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 PPP1R21Q6ZMI0 780 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 ZNF534Q76KX8 674 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 AMIGO1Q86WK6 493 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 TBC1D21Q8IYX1 336 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 TAB3Q8N5C8 712 aaPredicted RBP7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 CCDC89Q8N998 374 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 TMEM102Q8N9M5 508 aaPredicted RBP7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 GLIS1Q8NBF1 620 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 PHC3Q8NDX5 983 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 TRIM58Q8NG06 486 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 OR52E1Q8NGJ3 308 aa7.71□□□□□ -1.18
UBE2D3-222ENST00000508238 OR4L1Q8NH43 312 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms