RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CPZQ66K79 652 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 NLRP9Q7RTR0 991 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 TAX1BP1Q86VP1 789 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 DSELQ8IZU8 1212 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 C19orf47Q8N9M1 422 aaKnown RBP16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 CFAP61Q8NHU2 1237 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 MR1Q95460 341 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 FAM136AQ96C01 138 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 CATSPER2Q96P56 530 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 EFHD1Q9BUP0 239 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 IL22Q9GZX6 179 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 SPRTNQ9H040 489 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 GRPEL1Q9HAV7 217 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 IGSF5Q9NSI5 407 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 TEX15Q9BXT5 2789 aa16.16■□□□□ 0.18
PDLIM7-215ENST00000506161 MDC1Q14676 2089 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 USP27XA6NNY8 438 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 GOLGA8MH3BSY2 632 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 QSOX1O00391 747 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 PRMT5O14744 637 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 SLCO2B1O94956 709 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 SHMT2P34897 504 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 COILP38432 576 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 YBX1P67809 324 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 TLE1Q04724 770 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 CYP1B1Q16678 543 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 KYNUQ16719 465 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 CENPUQ71F23 418 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 APOBEC4Q8WW27 367 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 MAIP1Q8WWC4 291 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 LPGAT1Q92604 370 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 SLC30A3Q99726 388 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 ADNPQ9H2P0 1102 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 MRM3Q9HC36 420 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 BFARQ9NZS9 450 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 PCDHB3Q9Y5E6 796 aa16.15■□□□□ 0.18
PDLIM7-215ENST00000506161 MEN1O00255 615 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 MATN2O00339 956 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 MT-ND3P03897 115 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 CCNYL3P0C7X3 344 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 MSL3P1P0C860 447 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 CBSLP0DN79 551 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 RPS3P23396 243 aaKnown RBP eCLIP16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 PTPN4P29074 926 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 CBSP35520 551 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 EIF3BP55884 814 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 GBX1Q14549 363 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 TYSND1Q2T9J0 566 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 TMTC4Q5T4D3 741 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 BPHLQ86WA6 291 aaPredicted RBP16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 ADAMTS17Q8TE56 1095 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 DENND1AQ8TEH3 1009 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 MAGOHBQ96A72 148 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 OSBPL9Q96SU4 736 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 TRMT1Q9NXH9 659 aaKnown RBP16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 TP53TG5Q9Y2B4 290 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 MED16Q9Y2X0 877 aa16.14■□□□□ 0.17
PDLIM7-215ENST00000506161 A0A0J9YY10 115 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 C21orf140B9A014 251 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 ZNF749O43361 778 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 PRICKLE3O43900 615 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 CNOT3O75175 753 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 ATXN8OSP0DMR3 200 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 MAGP20916 626 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 PSMB5P28074 263 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 FMO4P31512 558 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 MAGEA3P43357 314 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 MC1RQ01726 317 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 KIAA0930Q6ICG6 404 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 ZNF449Q6P9G9 518 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 CCDC137Q6PK04 289 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 DNAJC22Q8N4W6 341 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 DTWD1Q8N5C7 304 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 ENDOVQ8N8Q3 282 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 OR8K5Q8NH50 307 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 C9orf43Q8TAL5 461 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 LRFN5Q96NI6 719 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 ACTR5Q9H9F9 607 aaPredicted RBP16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 POLG2Q9UHN1 485 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 ANAPC5Q9UJX4 755 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 KCND3Q9UK17 655 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 POLHQ9Y253 713 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 FARSAQ9Y285 508 aaKnown RBP16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 CRYL1Q9Y2S2 319 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 JRKLQ9Y4A0 524 aa16.13■□□□□ 0.17
PDLIM7-215ENST00000506161 ZCWPW2A0A1B0GU75 182 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 ISM1B1AKI9 464 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 MASP2O00187 686 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 FANCGO15287 622 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 BANF1O75531 89 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 C1orf105O95561 183 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 ITGAXP20702 1163 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 PTGIRP43119 386 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 GCGRP47871 477 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 TTPAP49638 278 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 ITGA1P56199 1179 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 CDK16Q00536 496 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 UGT8Q16880 541 aa16.12■□□□□ 0.17
PDLIM7-215ENST00000506161 SLC5A12Q1EHB4 618 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms