RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CD46P15529 392 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 KELP23276 732 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 RPL10P27635 214 aaKnown RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 MAPK9P45984 424 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 HNMTP50135 292 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 IDH3AP50213 366 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 HTR6P50406 440 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 RPL14P50914 215 aaKnown RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 AQP5P55064 265 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 NAA20P61599 178 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 BNC1Q01954 994 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 BTKQ06187 659 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 PCDH1Q08174 1060 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 SRSF5Q13243 272 aaKnown RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 GTF2H2Q13888 395 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 FASTKQ14296 549 aaKnown RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 PTCHD3Q3KNS1 767 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 TCHHL1Q5QJ38 904 aaPredicted RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 SH2D4BQ5SQS7 431 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 CLEC6AQ6EIG7 209 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 GTF2H2CQ6P1K8 395 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 AGTRAPQ6RW13 159 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 ABRAXAS1Q6UWZ7 409 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 WASH2PQ6VEQ5 465 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 SLC36A4Q6YBV0 504 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 RAB44Q7Z6P3 723 aaPredicted RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 DCUN1D3Q8IWE4 304 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 SFTPA2Q8IWL1 248 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 CACNA2D3Q8IZS8 1091 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 TCAIMQ8N3R3 496 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 MFSD2AQ8NA29 543 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 CCDC197Q8NCU1 140 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 OR5K2Q8NHB8 316 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 CFAP61Q8NHU2 1237 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 AGR3Q8TD06 166 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 SREK1Q8WXA9 508 aaKnown RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 SNX19Q92543 992 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 SPACA7Q96KW9 195 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 CCDC138Q96M89 665 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 OR52B2Q96RD2 323 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 UCN2Q96RP3 112 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 SGPP1Q9BX95 441 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 ILKAPQ9H0C8 392 aaPredicted RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 ZNF385DQ9H6B1 395 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 WASH6PQ9NQA3 447 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 ABCF3Q9NUQ8 709 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 INTS7Q9NVH2 962 aaKnown RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 TRNAU1APQ9NX07 287 aaKnown RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 WWOXQ9NZC7 414 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 ACSL5Q9ULC5 683 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 PLAGL1Q9UM63 463 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 ARL2BPQ9Y2Y0 163 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 GPSM3Q9Y4H4 160 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 PCDHGA10Q9Y5H3 936 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 TNPO3Q9Y5L0 923 aaKnown RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 PTGDR2Q9Y5Y4 395 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 CFAP20Q9Y6A4 193 aaKnown RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 SNRNP200O75643 2136 aaKnown RBP10.1□□□□□ -0.79
TPM3-217ENST00000504663 SPAG17Q6Q759 2223 aa10.1□□□□□ -0.79
TPM3-217ENST00000504663 CACNA1EQ15878 2313 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 A0A0G2JND7 137 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 OR52A4PA6NMU1 304 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 E7ENX8 843 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 HDAC3O15379 428 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 STK16O75716 305 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 CD22P20273 847 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 HK2P52789 917 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 THOP1P52888 689 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 ARFIP2P53365 341 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 NXPH1P58417 271 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 TBPL1P62380 186 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 RACK1P63244 317 aaKnown RBP10.09□□□□□ -0.79
TPM3-217ENST00000504663 TAP2Q03519 686 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 LRP8Q14114 963 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 RPE65Q16518 533 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 UAP1L1Q3KQV9 507 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 USP39Q53GS9 565 aaKnown RBP10.09□□□□□ -0.79
TPM3-217ENST00000504663 XKR7Q5GH72 579 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 CFAP157Q5JU67 520 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 PMS2CLQ68D20 193 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 TTC23LQ6PF05 361 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 ALYREFQ86V81 257 aaKnown RBP10.09□□□□□ -0.79
TPM3-217ENST00000504663 IQCHQ86VS3 1027 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 PARGQ86W56 976 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 LONP2Q86WA8 852 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 TMEFF1Q8IYR6 380 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 RGL4Q8IZJ4 473 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 TEX9Q8N6V9 391 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 DCBLD1Q8N8Z6 715 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 LINC01555Q8NAE3 123 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 DTWD2Q8NBA8 298 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 PPFIBP2Q8ND30 876 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 PHC3Q8NDX5 983 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 OR4F6Q8NGB9 312 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 OR9A1PQ8NGU1 263 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 FAM174AQ8TBP5 190 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 MCOLN3Q8TDD5 553 aa10.09□□□□□ -0.79
TPM3-217ENST00000504663 SKA2Q8WVK7 121 aaPredicted RBP10.09□□□□□ -0.79
TPM3-217ENST00000504663 TFGQ92734 400 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms