RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 FNTBP49356 437 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 RAB13P51153 203 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 CAPZA1P52907 286 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 GALCP54803 685 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 ABCE1P61221 599 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 OVGP1Q12889 678 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 GRIK2Q13002 908 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 MMRN1Q13201 1228 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 KCNAB2Q13303 367 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 BTN1A1Q13410 526 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 IKZF1Q13422 519 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 KCNJ11Q14654 390 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 CBX2Q14781 532 aaPredicted RBP9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 TBCCQ15814 346 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 FAM214AQ32MH5 1076 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 BSPRYQ5W0U4 402 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 OR6B2Q6IFH4 312 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 MSANTD2Q6P1R3 559 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 LINC00523Q86TU6 105 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 TRABD2AQ86V40 505 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 LIX1LQ8IVB5 337 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 UBQLNLQ8IYU4 475 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 CLEC4FQ8N1N0 589 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 CAMKK1Q8N5S9 505 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 AVL9Q8NBF6 648 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 ITFG1Q8TB96 612 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 ZFAND1Q8TCF1 268 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 MRPS31Q92665 395 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 ZC3H10Q96K80 434 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 TRIM56Q9BRZ2 755 aaKnown RBP9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 THAP2Q9H0W7 228 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 POMKQ9H5K3 350 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 POPDC2Q9HBU9 364 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 SCML1Q9UN30 329 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 NR2E1Q9Y466 385 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 MFHAS1Q9Y4C4 1052 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 DMRT1Q9Y5R6 373 aa9.42□□□□□ -0.9
PDLIM5-207ENST00000503974 C7orf72A4D263 438 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 PDZK1P1A8MUH7 402 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 TERTO14746 1132 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 DHFRP00374 187 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 H2AFZP0C0S5 128 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 BMP4P12644 408 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 BMP1P13497 986 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 CEBPBP17676 345 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 NELFEP18615 380 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 FSHRP23945 695 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 GSTM5P46439 218 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 GNPDA1P46926 289 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 RIDAP52758 137 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 SPCS3P61009 180 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 YWHAZP63104 245 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 ZNF91Q05481 1191 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 ILF2Q12905 390 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 MAMLD1Q13495 774 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 TEAD2Q15562 447 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 SLC1A5Q15758 541 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 MAPK11Q15759 364 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 GEN1Q17RS7 908 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 TUSC1Q2TAM9 212 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 SETMARQ53H47 684 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 FBXO48Q5FWF7 155 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 TCTE1Q5JU00 501 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 FAM102AQ5T9C2 384 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 TRNP1Q6NT89 227 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 CLEC2AQ6UVW9 174 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 TFAP2EQ6VUC0 442 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 H2AFVQ71UI9 128 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 LYSMD2Q8IV50 215 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 CCDC103Q8IW40 242 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 NPAS3Q8IXF0 933 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 ARFGAP1Q8N6T3 406 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 OR13F1Q8NGS4 319 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 RAB2BQ8WUD1 216 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 NT5C3BQ969T7 300 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 RADILQ96JH8 1075 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 KLHL32Q96NJ5 620 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 ATXN3LQ9H3M9 355 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 TASP1Q9H6P5 420 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 CHORDC1Q9UHD1 332 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 MBD1Q9UIS9 605 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 RAB23Q9ULC3 237 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 CHTOPQ9Y3Y2 248 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 PCDHGA9Q9Y5G4 932 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 REV3LO60673 3130 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 ACSL3O95573 720 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 LDOC1O95751 146 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 IGLV3-25P01717 112 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 GJA1P17302 382 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 MATN1P21941 496 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 ATP5C1P36542 298 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 SPAM1P38567 509 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 TSPAN5P62079 268 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 GPC5P78333 572 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 CDH17Q12864 832 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 EIF4EBP2Q13542 120 aaPredicted RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 GRB7Q14451 532 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 KCNAB1Q14722 419 aa9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 SMAD2Q15796 467 aaKnown RBP9.41□□□□□ -0.9
PDLIM5-207ENST00000503974 STXBP5Q5T5C0 1151 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms