RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SYTL2Q9HCH5 934 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 CATSPERZQ9NTU4 200 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 OR6C2Q9NZP2 312 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 POLG2Q9UHN1 485 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 TCFL5Q9UL49 500 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 PLAAQ9Y263 795 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 PCSK5Q92824 1860 aa15.69■□□□□ 0.1
SCLT1-204ENST00000503215 ISM1B1AKI9 464 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 E7EQ34 232 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 CD3EAPO15446 510 aaKnown RBP15.68■□□□□ 0.1
SCLT1-204ENST00000503215 RAB40ALP0C0E4 278 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 CCDC175P0C221 793 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 MGAT1P26572 445 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 AOAHP28039 575 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 FOXK1P85037 733 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 TRIP13Q15645 432 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-204ENST00000503215 C1orf189Q5VU69 101 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 TAX1BP1Q86VP1 789 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 LRRC8AQ8IWT6 810 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 PRELID2Q8N945 189 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 THAP4Q8WY91 577 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 MFSD3Q96ES6 412 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 TRIM56Q9BRZ2 755 aaKnown RBP15.68■□□□□ 0.1
SCLT1-204ENST00000503215 CARD6Q9BX69 1037 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 ING2Q9H160 280 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 EIF2B3Q9NR50 452 aaKnown RBP15.68■□□□□ 0.1
SCLT1-204ENST00000503215 SYBUQ9NX95 663 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 TTC7AQ9ULT0 858 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-204ENST00000503215 RUVBL2Q9Y230 463 aaKnown RBP15.68■□□□□ 0.1
SCLT1-204ENST00000503215 FER1L5A0AVI2 2057 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 FLNCQ14315 2725 aa15.68■□□□□ 0.1
SCLT1-204ENST00000503215 A0A0J9YY10 115 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 GOLGA8KD6RF30 607 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 GOLGA8TH3BQL2 631 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 PRMT5O14744 637 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-204ENST00000503215 AVILO75366 819 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 OR2B3O76000 313 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 SLCO2B1O94956 709 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 PKLRP30613 574 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 MLLT10P55197 1068 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 PLOD1Q02809 727 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-204ENST00000503215 KLRB1Q12918 225 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 KYNUQ16719 465 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 CCSMST1Q4G0I0 132 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 DNAJC21Q5F1R6 531 aaKnown RBP15.67■□□□□ 0.1
SCLT1-204ENST00000503215 GSTA5Q7RTV2 222 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 HOOK3Q86VS8 718 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 DNAJC22Q8N4W6 341 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 ZBTB2Q8N680 514 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 ZNF655Q8N720 491 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-204ENST00000503215 ASZ1Q8WWH4 475 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 PEX13Q92968 403 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 TRIM44Q96DX7 344 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-204ENST00000503215 TCTN2Q96GX1 697 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 PKNOX2Q96KN3 472 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 TTC1Q99614 292 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 P2RY12Q9H244 342 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 DHCR7Q9UBM7 475 aaKnown RBP15.67■□□□□ 0.1
SCLT1-204ENST00000503215 SNX7Q9UNH6 387 aa15.67■□□□□ 0.1
SCLT1-204ENST00000503215 MAP3K7O43318 606 aa15.66■□□□□ 0.1
SCLT1-204ENST00000503215 F7P08709 466 aaPredicted RBP15.66■□□□□ 0.1
SCLT1-204ENST00000503215 VPS41P49754 854 aa15.66■□□□□ 0.1
SCLT1-204ENST00000503215 NCF4Q15080 339 aa15.66■□□□□ 0.1
SCLT1-204ENST00000503215 TTC27Q6P3X3 843 aa15.66■□□□□ 0.1
SCLT1-204ENST00000503215 MPP5Q8N3R9 675 aa15.66■□□□□ 0.1
SCLT1-204ENST00000503215 TEX19Q8NA77 164 aa15.66■□□□□ 0.1
SCLT1-204ENST00000503215 SLC7A5P2Q9GIP4 190 aa15.66■□□□□ 0.1
SCLT1-204ENST00000503215 TSR3Q9UJK0 312 aaKnown RBP15.66■□□□□ 0.1
SCLT1-204ENST00000503215 NFS1Q9Y697 457 aa15.66■□□□□ 0.1
SCLT1-204ENST00000503215 CCDC88CQ9P219 2028 aa15.66■□□□□ 0.1
SCLT1-204ENST00000503215 SPENQ96T58 3664 aaKnown RBP15.65■□□□□ 0.1
SCLT1-204ENST00000503215 DOPEY2Q9Y3R5 2298 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 MASP2O00187 686 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 CNOT3O75175 753 aaKnown RBP15.65■□□□□ 0.1
SCLT1-204ENST00000503215 KLF7O75840 302 aaPredicted RBP15.65■□□□□ 0.1
SCLT1-204ENST00000503215 VAPBO95292 243 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 APOA4P06727 396 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 MAGP20916 626 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 GRIA3P42263 894 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 NPY2RP49146 381 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 RAB28P51157 221 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 SLC9A5Q14940 896 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 KIR2DS3Q14952 304 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 SLC5A12Q1EHB4 618 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 CTSL3PQ5NE16 218 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 MLIPQ5VWP3 458 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 ANKRD22Q5VYY1 191 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 PTRHD1Q6GMV3 140 aaKnown RBP15.65■□□□□ 0.1
SCLT1-204ENST00000503215 GPR135Q8IZ08 494 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 SEC14L1Q92503 715 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 N4BP2L2Q92802 583 aaPredicted RBP15.65■□□□□ 0.1
SCLT1-204ENST00000503215 FAM136AQ96C01 138 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 MS4A14Q96JA4 679 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 GBP5Q96PP8 586 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 SLC25A23Q9BV35 468 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 KIFC1Q9BW19 673 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 IL22Q9GZX6 179 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 CHRNA10Q9GZZ6 450 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 MLXIPLQ9NP71 852 aa15.65■□□□□ 0.1
SCLT1-204ENST00000503215 ACSS2Q9NR19 701 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms