RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 LOXL2Q9Y4K0 774 aa24.33■■□□□ 1.49
LSM6-202ENST00000502781 A0A087WUV0 522 aaPredicted RBP24.32■■□□□ 1.48
LSM6-202ENST00000502781 TLCD2A6NGC4 264 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 RASGRF2O14827 1237 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 RIPK2O43353 540 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 ITGA2BP08514 1039 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 CHRM5P08912 532 aaPredicted RBP24.32■■□□□ 1.48
LSM6-202ENST00000502781 ERGP11308 486 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 KPNA2P52292 529 aaKnown RBP24.32■■□□□ 1.48
LSM6-202ENST00000502781 ZNF460Q14592 562 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 ZKSCAN8Q15776 578 aaPredicted RBP24.32■■□□□ 1.48
LSM6-202ENST00000502781 ARMC6Q6NXE6 501 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 FAM92BQ6ZTR7 304 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 FBXO39Q8N4B4 442 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 OR2L8Q8NGY9 312 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 FLVCR1-AS1Q8TAF5 88 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 HMGCLL1Q8TB92 370 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 SLC44A1Q8WWI5 657 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 DLG3Q92796 817 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 IL17FQ96PD4 163 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 MAP3K3Q99759 626 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 RAB11FIP5Q9BXF6 653 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 EPB41L4BQ9H329 900 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 SPATA7Q9P0W8 599 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 DKK4Q9UBT3 224 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 CIDEBQ9UHD4 219 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 SLC39A10Q9ULF5 831 aa24.32■■□□□ 1.48
LSM6-202ENST00000502781 HMX2A2RU54 273 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 KRT87PA6NCN2 255 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 A8MU76 341 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 C2orf74A8MZ97 194 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 SAT1P21673 171 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 CSTF2P33240 577 aaKnown RBP eCLIP24.31■■□□□ 1.48
LSM6-202ENST00000502781 MLLT3P42568 568 aaPredicted RBP24.31■■□□□ 1.48
LSM6-202ENST00000502781 GABREP78334 506 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 SP140Q13342 867 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 USP10Q14694 798 aaKnown RBP24.31■■□□□ 1.48
LSM6-202ENST00000502781 CACHD1Q5VU97 1274 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 MYO1HQ8N1T3 1032 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 OR9A1PQ8NGU1 263 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 ANKRD7Q92527 254 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 UBXN4Q92575 508 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 TSPAN17Q96FV3 270 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 SLC41A2Q96JW4 573 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 SLC12A9Q9BXP2 914 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 PITPNM3Q9BZ71 974 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 CAB39LQ9H9S4 337 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 SYTL2Q9HCH5 934 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 SPHK1Q9NYA1 384 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 ACTR10Q9NZ32 417 aa24.31■■□□□ 1.48
LSM6-202ENST00000502781 IGHV5-51A0A0C4DH38 117 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 PIPSLA2A3N6 862 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 SLC16A5O15375 505 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 ZBTB14O43829 449 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 C8GP07360 202 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 HGFP14210 728 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 PRDX3P30048 256 aaKnown RBP24.3■■□□□ 1.48
LSM6-202ENST00000502781 PEBP1P30086 187 aaKnown RBP24.3■■□□□ 1.48
LSM6-202ENST00000502781 VSNL1P62760 191 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 CYP2A13Q16696 494 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 WDR93Q6P2C0 686 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 NKAPQ8N5F7 415 aaKnown RBP24.3■■□□□ 1.48
LSM6-202ENST00000502781 BMPERQ8N8U9 685 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 SLC46A1Q96NT5 459 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 AKAP7Q9P0M2 348 aaPredicted RBP24.3■■□□□ 1.48
LSM6-202ENST00000502781 ADAMTS6Q9UKP5 1117 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 ACACBO00763 2458 aa24.3■■□□□ 1.48
LSM6-202ENST00000502781 GSAPA4D1B5 854 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 PRICKLE3O43900 615 aaPredicted RBP24.29■■□□□ 1.48
LSM6-202ENST00000502781 CCL4P13236 92 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 STMN1P16949 149 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 CSRP3P50461 194 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 SLC12A2P55011 1212 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 KIR2DS3Q14952 304 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 ANKS6Q68DC2 871 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 UNQ6494/PRO21346Q6UXR6 183 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 UBE2R2Q712K3 238 aaPredicted RBP24.29■■□□□ 1.48
LSM6-202ENST00000502781 KMT5CQ86Y97 462 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 LSMEM2Q8N112 164 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 ANKRD49Q8WVL7 239 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 PPM1MQ96MI6 270 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 OR2A14Q96R47 310 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 PKP4Q99569 1192 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 GPAMQ9HCL2 828 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 ASCL3Q9NQ33 180 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 C1GALT1Q9NS00 363 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 SIDT1Q9NXL6 827 aaKnown RBP24.29■■□□□ 1.48
LSM6-202ENST00000502781 C1QTNF9BB2RNN3 333 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 RASSF9O75901 435 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 C1QTNF9P0C862 333 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 FGF3P11487 239 aaPredicted RBP24.29■■□□□ 1.48
LSM6-202ENST00000502781 UGT2B7P16662 529 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 NELFEP18615 380 aaKnown RBP24.29■■□□□ 1.48
LSM6-202ENST00000502781 ITIH1P19827 911 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 RAB10P61026 200 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 ARHGAP19Q14CB8 494 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 ERCC6LQ2NKX8 1250 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 SPESP1Q6UW49 350 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 UHMK1Q8TAS1 419 aaKnown RBP24.29■■□□□ 1.48
LSM6-202ENST00000502781 MRRFQ96E11 262 aaKnown RBP24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms