RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 FAM20CQ8IXL6 584 aa14.14□□□□□ -0.15
TRAF4-212ENST00000498540 MOCOSQ96EN8 888 aa14.14□□□□□ -0.15
TRAF4-212ENST00000498540 DNAJC1Q96KC8 554 aaKnown RBP14.14□□□□□ -0.15
TRAF4-212ENST00000498540 AGAP4Q96P64 663 aa14.14□□□□□ -0.15
TRAF4-212ENST00000498540 CHP1Q99653 195 aa14.14□□□□□ -0.15
TRAF4-212ENST00000498540 NDC1Q9BTX1 674 aa14.14□□□□□ -0.15
TRAF4-212ENST00000498540 CDC23Q9UJX2 597 aa14.14□□□□□ -0.15
TRAF4-212ENST00000498540 PLAGL1Q9UM63 463 aa14.14□□□□□ -0.15
TRAF4-212ENST00000498540 ASF1AQ9Y294 204 aa14.14□□□□□ -0.15
TRAF4-212ENST00000498540 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.14□□□□□ -0.155e-8■■■■□ 23.6
TRAF4-212ENST00000498540 HS3ST3B1Q9Y662 390 aa14.14□□□□□ -0.15
TRAF4-212ENST00000498540 CSMD2Q7Z408 3487 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 CCDC78A2IDD5 438 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 H7C0C1 242 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 STSP08842 583 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 ALAS2P22557 587 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 ACADLP28330 430 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 GRNP28799 593 aaKnown RBP14.13□□□□□ -0.15
TRAF4-212ENST00000498540 ATP5OP48047 213 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 BRD3Q15059 726 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 GPR33Q49SQ1 333 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 B3GNTL1Q67FW5 361 aaPredicted RBP14.13□□□□□ -0.15
TRAF4-212ENST00000498540 ITPRIPL1Q6GPH6 555 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 KIRREL2Q6UWL6 708 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 CCDC50Q8IVM0 306 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 MCEMP1Q8IX19 187 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 PIANPQ8IYJ0 282 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 OR8K1Q8NGG5 319 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 FKBP10Q96AY3 582 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 SPSB2Q99619 263 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 SLX1AQ9BQ83 275 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 PLCL2Q9UPR0 1127 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 KLHL20Q9Y2M5 609 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 TDRKHQ9Y2W6 561 aaKnown RBP14.13□□□□□ -0.15
TRAF4-212ENST00000498540 PRSS21Q9Y6M0 314 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 C2CD3Q4AC94 2353 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 POLQO75417 2590 aa14.13□□□□□ -0.15
TRAF4-212ENST00000498540 F8P00451 2351 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 ISM1B1AKI9 464 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 MAGP20916 626 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 Q0VFX4 171 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 SPARCL1Q14515 664 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 NKG7Q16617 165 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 DBN1Q16643 649 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 SLC5A12Q1EHB4 618 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 ANKRD20A2Q5SQ80 823 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 ANKRD20A1Q5TYW2 823 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 ANKRD20A3Q5VUR7 823 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 NAPRTQ6XQN6 538 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 SHISA6Q6ZSJ9 500 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 TTLL10Q6ZVT0 673 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 BBS12Q6ZW61 710 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 COX15Q7KZN9 410 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 TAS2R42Q7RTR8 314 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 PARP9Q8IXQ6 854 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 KATNAL2Q8IYT4 538 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 TBC1D21Q8IYX1 336 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 OR5K2Q8NHB8 316 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 COG1Q8WTW3 980 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.12□□□□□ -0.15
TRAF4-212ENST00000498540 NACC2Q96BF6 587 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 C19orf43Q9BQ61 176 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 TBL1YQ9BQ87 522 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 MESP1Q9BRJ9 268 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 HEMGNQ9BXL5 484 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 WDR54Q9H977 334 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 NHEJ1Q9H9Q4 299 aaPredicted RBP14.12□□□□□ -0.15
TRAF4-212ENST00000498540 EURLQ9NYK6 297 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 OR6C2Q9NZP2 312 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 AAR2Q9Y312 384 aaKnown RBP14.12□□□□□ -0.15
TRAF4-212ENST00000498540 ALG6Q9Y672 507 aa14.12□□□□□ -0.15
TRAF4-212ENST00000498540 CELSR1Q9NYQ6 3014 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 A0A1B0GX78 115 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 SYCE3A1L190 88 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 APOC4-APOC2K7ER74 178 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 LIN7AO14910 233 aaPredicted RBP14.11□□□□□ -0.15
TRAF4-212ENST00000498540 ZRANB2O95218 330 aaKnown RBP eCLIP14.11□□□□□ -0.15
TRAF4-212ENST00000498540 APOC2P02655 101 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 GSTM1P09488 218 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 RIPPLY3P57055 190 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 GSTM4Q03013 218 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 TCEAL1Q15170 157 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 TLR1Q15399 786 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 IRAK1BP1Q5VVH5 260 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 FAM180AQ6UWF9 173 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 OVCH1Q7RTY7 1134 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 RCOR2Q8IZ40 523 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 ADGRG4Q8IZF6 3080 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 CATSPER1Q8NEC5 780 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 ELMO1Q92556 727 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 DLG3Q92796 817 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 THOC3Q96J01 351 aaKnown RBP14.11□□□□□ -0.15
TRAF4-212ENST00000498540 CCDC42Q96M95 316 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 ANP32EQ9BTT0 268 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 LHPPQ9H008 270 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 SOX17Q9H6I2 414 aaPredicted RBP14.11□□□□□ -0.15
TRAF4-212ENST00000498540 EPS8L2Q9H6S3 715 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 ABHD10Q9NUJ1 306 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 OLAHQ9NV23 265 aa14.11□□□□□ -0.15
TRAF4-212ENST00000498540 ZNHIT6Q9NWK9 470 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms