RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TRAPPC9Q96Q05 1148 aa12.39□□□□□ -0.43
HSPG2-213ENST00000498495 AARSD1Q9BTE6 412 aaKnown RBP12.39□□□□□ -0.43
HSPG2-213ENST00000498495 ULBP3Q9BZM4 244 aa12.39□□□□□ -0.43
HSPG2-213ENST00000498495 FGF21Q9NSA1 209 aa12.39□□□□□ -0.43
HSPG2-213ENST00000498495 SPHK1Q9NYA1 384 aa12.39□□□□□ -0.43
HSPG2-213ENST00000498495 KLHL42Q9P2K6 505 aa12.39□□□□□ -0.43
HSPG2-213ENST00000498495 CIDEBQ9UHD4 219 aa12.39□□□□□ -0.43
HSPG2-213ENST00000498495 LNPEPQ9UIQ6 1025 aa12.39□□□□□ -0.43
HSPG2-213ENST00000498495 BTRCQ9Y297 605 aa12.39□□□□□ -0.43
HSPG2-213ENST00000498495 DHRS7Q9Y394 339 aa12.39□□□□□ -0.43
HSPG2-213ENST00000498495 TMEM184BQ9Y519 407 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-213ENST00000498495 CACNA1BQ00975 2339 aa12.39□□□□□ -0.43
HSPG2-213ENST00000498495 FREM2Q5SZK8 3169 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 E7ESA3 106 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 K7ENP7 123 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 KIF2AO00139 706 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-213ENST00000498495 RASGRF2O14827 1237 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 EFSO43281 561 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 KIAA0754O94854 1291 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 MATN4O95460 622 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 CCNYL3P0C7X3 344 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 ST6GAL1P15907 406 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 UGT2B7P16662 529 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 ZNF28P17035 718 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 PKLRP30613 574 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 SKIV2L2P42285 1042 aaKnown RBP12.38□□□□□ -0.43
HSPG2-213ENST00000498495 TUBB4BP68371 445 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 CAV1Q03135 178 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 TUBB2AQ13885 445 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 GRB7Q14451 532 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 GBX1Q14549 363 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 KIR2DS3Q14952 304 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 WHAMMP3Q1A5X7 153 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 DUPD1Q68J44 220 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 INO80CQ6PI98 192 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-213ENST00000498495 KIAA0408Q6ZU52 694 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 TIPARPQ7Z3E1 657 aaKnown RBP12.38□□□□□ -0.43
HSPG2-213ENST00000498495 VASH2Q86V25 355 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 CNTN4Q8IWV2 1026 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 C2orf73Q8N5S3 287 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-213ENST00000498495 ZSCAN1Q8NBB4 408 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 PYROXD1Q8WU10 500 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 SLC22A18Q96BI1 424 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 IL17FQ96PD4 163 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 OR2A14Q96R47 310 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 GPR21Q99679 349 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 SLC30A3Q99726 388 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 TUBB2BQ9BVA1 445 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 RAB11FIP5Q9BXF6 653 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 PITPNM3Q9BZ71 974 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 KLHL25Q9H0H3 589 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 FANCEQ9HB96 536 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 SYTL2Q9HCH5 934 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-213ENST00000498495 RUVBL2Q9Y230 463 aaKnown RBP12.38□□□□□ -0.43
HSPG2-213ENST00000498495 DMXL2Q8TDJ6 3036 aa12.38□□□□□ -0.43
HSPG2-213ENST00000498495 TEX51A0A1B0GUA7 166 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 EIF3HO15372 352 aaKnown RBP eCLIP12.37□□□□□ -0.43
HSPG2-213ENST00000498495 DLGAP3O95886 979 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 MT-ND3P03897 115 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 MPC1LP0DKB6 136 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 CBSLP0DN79 551 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 ENO3P13929 434 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-213ENST00000498495 PVRP15151 417 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 GABRB3P28472 473 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 CBSP35520 551 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 BDKRB1P46663 353 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 PLTPP55058 493 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 MGAT5Q09328 741 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 CBLBQ13191 982 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 SRSF6Q13247 344 aaKnown RBP12.37□□□□□ -0.43
HSPG2-213ENST00000498495 CUL1Q13616 776 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 MAP7Q14244 749 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 FRG1Q14331 258 aaKnown RBP12.37□□□□□ -0.43
HSPG2-213ENST00000498495 SF1Q15637 639 aaKnown RBP12.37□□□□□ -0.43
HSPG2-213ENST00000498495 GPR19Q15760 415 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 SLC5A12Q1EHB4 618 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 CCSMST1Q4G0I0 132 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 STEAP4Q687X5 459 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 TRMT10BQ6PF06 316 aaKnown RBP12.37□□□□□ -0.43
HSPG2-213ENST00000498495 C6orf15Q6UXA7 325 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-213ENST00000498495 NEK10Q6ZWH5 1172 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 ESX1Q8N693 406 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 OR2L8Q8NGY9 312 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 OR8K5Q8NH50 307 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 N4BP2L2Q92802 583 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-213ENST00000498495 ZNF501Q96CX3 271 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-213ENST00000498495 RNF31Q96EP0 1072 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 TCTN2Q96GX1 697 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 NDNQ99608 321 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 WDR83Q9BRX9 315 aaKnown RBP12.37□□□□□ -0.43
HSPG2-213ENST00000498495 MENTQ9BUN1 341 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 PLAC1Q9HBJ0 212 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 SAYSD1Q9NPB0 183 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 TAS2R13Q9NYV9 303 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 TRMT6Q9UJA5 497 aaKnown RBP12.37□□□□□ -0.43
HSPG2-213ENST00000498495 SERTAD3Q9UJW9 196 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 MED16Q9Y2X0 877 aa12.37□□□□□ -0.43
HSPG2-213ENST00000498495 USP24Q9UPU5 2620 aa12.36□□□□□ -0.43
HSPG2-213ENST00000498495 A0A0J9YY10 115 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms