RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 GPR135Q8IZ08 494 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 RASGEF1CQ8N431 466 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 OTUD6BQ8N6M0 293 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 CFAP61Q8NHU2 1237 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 FLVCR1-AS1Q8TAF5 88 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 GSDMBQ8TAX9 411 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 MFSD3Q96ES6 412 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 TCTN2Q96GX1 697 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 PBKQ96KB5 322 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 KIFC1Q9BW19 673 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 TRIM4Q9C037 500 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 P2RY12Q9H244 342 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 CHST8Q9H2A9 424 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 ACTR5Q9H9F9 607 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 ZNF71Q9NQZ8 489 aaPredicted RBP8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 SPHK1Q9NYA1 384 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 PLAGL1Q9UM63 463 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 SOX13Q9UN79 622 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 MAN2B2Q9Y2E5 1009 aa8.19□□□□□ -1.1
HMGXB4-207ENST00000498212 ANKRD12Q6UB98 2062 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 PIEZO2Q9H5I5 2752 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 KPNA5O15131 536 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 PFDN6O15212 129 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 ZNF749O43361 778 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 RFPL1O75677 317 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 SLCO2B1O94956 709 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 VAPBO95292 243 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 WISP1O95388 367 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 KRT14P02533 472 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 HBQ1P09105 142 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 RAB40ALP0C0E4 278 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 PAMP19021 973 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 ARNTP27540 789 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 PEBP1P30086 187 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 MAGEA6P43360 314 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 RAB28P51157 221 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 PMS2P54278 862 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 EIF3BP55884 814 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 IL10RAQ13651 578 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 ZIC1Q15915 447 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 KYNUQ16719 465 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 SLC5A12Q1EHB4 618 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 DEFB110Q30KQ9 67 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 PTCHD3Q3KNS1 767 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 RNF187Q5TA31 235 aaPredicted RBP8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 ARMC3Q5W041 872 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 LCN10Q6JVE6 187 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 MRNIPQ6NTE8 343 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 TTC27Q6P3X3 843 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 TTC23LQ6PF05 361 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 CCDC137Q6PK04 289 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 OTOAQ7RTW8 1153 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 SDCCAG8Q86SQ7 713 aaPredicted RBP8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 APLFQ8IW19 511 aaPredicted RBP8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 DCUN1D3Q8IWE4 304 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 SYTL1Q8IYJ3 562 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 ENDOVQ8N8Q3 282 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 THAP4Q8WY91 577 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 MAGOHBQ96A72 148 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 SLC22A18Q96BI1 424 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 MS4A14Q96JA4 679 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 NAP1L3Q99457 506 aaPredicted RBP8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 DPH2Q9BQC3 489 aaPredicted RBP8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 NLNQ9BYT8 704 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 FAM60AQ9NP50 221 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 PCMTD2Q9NV79 361 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 SAMD15Q9P1V8 674 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 ANAPC2Q9UJX6 822 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 SNX7Q9UNH6 387 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 TP53TG5Q9Y2B4 290 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 MDC1Q14676 2089 aaKnown RBP8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 MED13Q9UHV7 2174 aa8.18□□□□□ -1.1
HMGXB4-207ENST00000498212 GCN1Q92616 2671 aaKnown RBP8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 HEATR5BQ9P2D3 2071 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 GOLGA8KD6RF30 607 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 H3BMH7 237 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 H3BMM5 538 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 GOLGA8TH3BQL2 631 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 PGRMC1O00264 195 aaKnown RBP8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 RASGRF2O14827 1237 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 HCRTR1O43613 425 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 AVILO75366 819 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 OR2B3O76000 313 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 TMEM63AO94886 807 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 S1PR4O95977 384 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 OGNP20774 298 aaKnown RBP8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 MAGP20916 626 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 AGXTP21549 392 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 CD9P21926 228 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 COILP38432 576 aaPredicted RBP8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 GABRA4P48169 554 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 CSRP3P50461 194 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 KCNC4Q03721 635 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 TLE1Q04724 770 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 GRB7Q14451 532 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 CYP1B1Q16678 543 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 TYSND1Q2T9J0 566 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 CTSL3PQ5NE16 218 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 ANKRD22Q5VYY1 191 aa8.17□□□□□ -1.1
HMGXB4-207ENST00000498212 KIAA0930Q6ICG6 404 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms