RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PRR27Q6MZM9 219 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 GAGE2AQ6NT46 116 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ANKRD54Q6NXT1 300 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 RANBP10Q6VN20 620 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ATG14Q6ZNE5 492 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 RBM44Q6ZP01 1051 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 DCDC5Q6ZRR9 648 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TPRG1Q6ZUI0 275 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TRILQ7L0X0 811 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 HAUS6Q7Z4H7 955 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TFAP2DQ7Z6R9 452 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 CENPVQ7Z7K6 275 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 RBM23Q86U06 439 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 IGFN1Q86VF2 1251 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 LCA5Q86VQ0 697 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 CIR1Q86X95 450 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 HSCBQ8IWL3 235 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SLC35F3Q8IY50 421 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SYCP3Q8IZU3 236 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 RBFAQ8N0V3 343 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TERB1Q8NA31 727 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 NHLRC2Q8NBF2 726 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SLC38A9Q8NBW4 561 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ZNF540Q8NDQ6 660 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 DEFB124Q8NES8 71 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 DBF4BQ8NFT6 615 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 HUS1BQ8NHY5 278 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 BICD2Q8TD16 824 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 LRRC8CQ8TDW0 803 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 UTP15Q8TED0 518 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 HASPINQ8TF76 798 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 IGFBPL1Q8WX77 278 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ROBO4Q8WZ75 1007 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 LINC00476Q8WZB0 136 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TMEM186Q96B77 213 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 PTERQ96BW5 349 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 PTCD3Q96EY7 689 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 MED8Q96G25 268 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 PDLIM2Q96JY6 352 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 NECTIN4Q96NY8 510 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 INTS14Q96SY0 518 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 MMS19Q96T76 1030 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ACOX2Q99424 681 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SH3GL2Q99962 352 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 FERMT1Q9BQL6 677 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 CRACR2AQ9BSW2 395 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 IFT27Q9BW83 186 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 IFIH1Q9BYX4 1025 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 FAM129AQ9BZQ8 928 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 UPF3AQ9H1J1 476 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ARRDC1-AS1Q9H2J1 176 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 MMADHCQ9H3L0 296 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 POMKQ9H5K3 350 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 THAP9Q9H5L6 903 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ACTR5Q9H9F9 607 aaPredicted RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 MAGEE1Q9HCI5 957 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 EPB41L5Q9HCM4 733 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 WDR6Q9NNW5 1121 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 GPR108Q9NPR9 543 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 EQTNQ9NQ60 294 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 IARS2Q9NSE4 1012 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 ZBTB40Q9NUA8 1239 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SLCO1C1Q9NYB5 712 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 NINJ2Q9NZG7 142 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 VPS18Q9P253 973 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 LARSQ9P2J5 1176 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 GAGE2DQ9UEU5 116 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 NDRG3Q9UGV2 375 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TSPYL4Q9UJ04 414 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 CNOT11Q9UKZ1 510 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SNX7Q9UNH6 387 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TNFSF13BQ9Y275 285 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 TESMINQ9Y4I5 508 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 LSM4Q9Y4Z0 139 aaKnown RBP2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 CLIC4Q9Y696 253 aa2.42□□□□□ -2.02
CKS1BP2-201ENST00000497342 SPAG17Q6Q759 2223 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 PATJQ8NI35 1801 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 SPAARA0A1B0GVQ0 90 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 A0A1W2PRV1 198 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 TCRBV7S3A2A0A539 114 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 DVL1O14640 695 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 RRHO14718 337 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 VEGFDO43915 354 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 HMMRO75330 724 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 BCAS2O75934 225 aaPredicted RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 CABYRO75952 493 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 APBB3O95704 486 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 PENKP01210 267 aaPredicted RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 GH2P01242 217 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 UROSP10746 265 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 KRT10P13645 584 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 ETFAP13804 333 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 MYL6BP14649 208 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 PFKFB1P16118 471 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 HOXB8P17481 243 aaPredicted RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 VCLP18206 1134 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 ACO1P21399 889 aaKnown RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 DNAJB1P25685 340 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 DCTDP32321 178 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 CTNNB1P35222 781 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms