RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 FAM237BA0A1B0GVD1 139 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 GOLGA6CA6NDK9 693 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 FAM159BA6NKW6 160 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 HEPACAM2A8MVW5 462 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 HMGB1P1B2RPK0 211 aaPredicted RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 NEDD8-MDP1E9PL57 170 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 K7ERQ8 282 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 SMAD6O43541 496 aaKnown RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 CDH16O75309 829 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 GOLGA6DP0CG33 693 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 LAMP2P13473 410 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 TYRP14679 529 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 ARSAP15289 507 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 TPH1P17752 444 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 ADRA1DP25100 572 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 PHBP35232 272 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 ABCG1P45844 678 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 ARCN1P48444 511 aaKnown RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 LMAN1P49257 510 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 NUMBP49757 651 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 CDKN1CP49918 316 aaPredicted RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 SERPINH1P50454 418 aaKnown RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 RPS7P62081 194 aaKnown RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 CRADDP78560 199 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 MC2RQ01718 297 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 CDK18Q07002 472 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 SRSF4Q08170 494 aaKnown RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 IFFO1Q0D2I5 559 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 GPS2Q13227 327 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 DMC1Q14565 340 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 ZNF235Q14590 738 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 CRYMQ14894 314 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 EFTUD2Q15029 972 aaKnown RBP eCLIP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 PDGFRLQ15198 375 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 PTPRRQ15256 657 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 SLC1A5Q15758 541 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 LONRF1Q17RB8 773 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 KLHL38Q2WGJ6 581 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 KBTBD12Q3ZCT8 623 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 CD300EQ496F6 205 aaPredicted RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 ANKRD20A4Q4UJ75 823 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 HSP90B2PQ58FF3 399 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 PCID2Q5JVF3 399 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 DGKKQ5KSL6 1271 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 RETSATQ6NUM9 610 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 VITQ6UXI7 678 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 GET4Q7L5D6 327 aaPredicted RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 ZNF354CQ86Y25 554 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 BBS5Q8N3I7 341 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 PPM1NQ8N819 430 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 ZNF557Q8N988 423 aaPredicted RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 GSDMBQ8TAX9 411 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 DCAKDQ8WVC6 231 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 SLC44A1Q8WWI5 657 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 ISG20Q96AZ6 181 aaKnown RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 FEM1CQ96JP0 617 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 RANBP9Q96S59 729 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 CYTH2Q99418 400 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 CCDC77Q9BR77 488 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 CINPQ9BW66 212 aaPredicted RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 BBS2Q9BXC9 721 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 TDRD1Q9BXT4 1180 aaKnown RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 PLA2G2FQ9BZM2 168 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 IL22Q9GZX6 179 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 MRM3Q9HC36 420 aaKnown RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 HPS4Q9NQG7 708 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 TREX1Q9NSU2 369 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 PIH1D1Q9NWS0 290 aaKnown RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 DUS2Q9NX74 493 aaKnown RBP5.33□□□□□ -1.56
GGPS1-208ENST00000497327 GOLGA6AQ9NYA3 693 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 VPS18Q9P253 973 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 CTNNAL1Q9UBT7 734 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 GGA2Q9UJY4 613 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 SLC27A6Q9Y2P4 619 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 MAD1L1Q9Y6D9 718 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 FAM169AQ9Y6X4 670 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 MYO9BQ13459 2157 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 TRIOBPQ9H2D6 2365 aa5.33□□□□□ -1.56
GGPS1-208ENST00000497327 MYO18AQ92614 2054 aaKnown RBP5.32□□□□□ -1.56
GGPS1-208ENST00000497327 LAMA2P24043 3122 aaKnown RBP5.32□□□□□ -1.56
GGPS1-208ENST00000497327 EXOC1LA0A1B0GW35 172 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 KRTAP29-1A8MX34 341 aaPredicted RBP5.32□□□□□ -1.56
GGPS1-208ENST00000497327 ANHXE9PGG2 379 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 TRAFD1O14545 582 aaPredicted RBP5.32□□□□□ -1.56
GGPS1-208ENST00000497327 RGS16O15492 202 aaPredicted RBP5.32□□□□□ -1.56
GGPS1-208ENST00000497327 HTRA2O43464 458 aaPredicted RBP5.32□□□□□ -1.56
GGPS1-208ENST00000497327 LDB2O43679 373 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 UGT1A9O60656 530 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 TULP3O75386 442 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 PIAS1O75925 651 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 NEBLO76041 1014 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 USP1O94782 785 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 PAPSS2O95340 614 aaPredicted RBP5.32□□□□□ -1.56
GGPS1-208ENST00000497327 NDST3O95803 873 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 GSRP00390 522 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 FGF1P05230 155 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 IVLP07476 585 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 PDHA1P08559 390 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 SERPINF2P08697 491 aa5.32□□□□□ -1.56
GGPS1-208ENST00000497327 SRCP12931 536 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms