RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 GRID2O43424 1007 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 ZDHHC11BP0C7U3 371 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 LHCGRP22888 699 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 ARCN1P48444 511 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 MGAT3Q09327 533 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 ZNF124Q15973 351 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 QRICH1Q2TAL8 776 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 LRRC66Q68CR7 880 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 CYS1Q717R9 158 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 PGBD3Q8N328 593 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 FSTL5Q8N475 847 aaPredicted RBP8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 KAT2AQ92830 837 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 ELMO3Q96BJ8 720 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 CDCA5Q96FF9 252 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 GMCL1Q96IK5 515 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 TREX2Q9BQ50 279 aaPredicted RBP8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 FBXL12Q9NXK8 326 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 CD300AQ9UGN4 299 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 LIPT1Q9Y234 373 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 SAMHD1Q9Y3Z3 626 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 A0A0G2JMP0 313 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 UBA6A0AVT1 1052 aaPredicted RBP8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 ASB14A6NK59 587 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 ISM1B1AKI9 464 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 M0QYV0 167 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 MSH4O15457 936 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 ADAM12O43184 909 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 LRCH4O75427 683 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 STAU1O95793 577 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 HMGCRP04035 888 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 WARSP23381 471 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 SCNN1GP51170 649 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 MFSD10Q14728 455 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 C10orf62Q5T681 223 aaPredicted RBP8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 FAM180BQ6P0A1 224 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 FAM198BQ6UWH4 519 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 DEF8Q6ZN54 512 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 TCTEX1D2Q8WW35 142 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 HTR3CQ8WXA8 447 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 NR4A3Q92570 626 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 PMM1Q92871 262 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 RNFT2Q96EX2 444 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 SIGLEC10Q96LC7 697 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 QRFPRQ96P65 431 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 TBCDQ9BTW9 1192 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 INVSQ9Y283 1065 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 NAALAD2Q9Y3Q0 740 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 ZNF451Q9Y4E5 1061 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 BCLAF3A2AJT9 711 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 MROH6A6NGR9 719 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 PER2O15055 1255 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 SLC22A3O75751 556 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 LALBAP00709 142 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 PTX3P26022 381 aaPredicted RBP8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 IL1R2P27930 398 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 RAB10P61026 200 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 ZNF543Q08ER8 600 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 COTL1Q14019 142 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 GPRC6AQ5T6X5 926 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 C3P1Q6ZMU1 363 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 DENND6AQ8IWF6 608 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 OR5J2Q8NH18 312 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 METTL6Q8TCB7 284 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 SPPL2BQ8TCT7 592 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 YIPF5Q969M3 257 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 YIPF6Q96EC8 236 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 TCEAL4Q96EI5 215 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 DNTTIP1Q9H147 329 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 LDAHQ9H6V9 325 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 SLC17A6Q9P2U8 582 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 POLG2Q9UHN1 485 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 ACAD8Q9UKU7 415 aa8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 UBQLN1Q9UMX0 589 aaKnown RBP8.03□□□□□ -1.12
CRNKL1-205ENST00000496549 A0A0A0MRY4 1105 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 C9JVG2 144 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 SMLR1H3BR10 107 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 CDC7O00311 574 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF195O14628 629 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 LYRM1O43325 122 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 RP2O75695 350 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 SPATA31C1P0DKV0 1188 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 HTR1EP28566 365 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 PRDX5P30044 214 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 GRM5P41594 1212 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 NRLP54845 237 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 CDC42P60953 191 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 CHAF1BQ13112 559 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 ASAH1Q13510 395 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 EXOSC2Q13868 293 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 RBBP7Q16576 425 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 TSTQ16762 297 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 RABL3Q5HYI8 236 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 NOMO2Q5JPE7 1267 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF691Q5VV52 312 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 LIPIQ6XZB0 460 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 LRRTM3Q86VH5 581 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 PPHLN1Q8NEY8 458 aaKnown RBP8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 OR7D4Q8NG98 312 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 RXFP2Q8WXD0 754 aa8.02□□□□□ -1.13
CRNKL1-205ENST00000496549 COQ8BQ96D53 544 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms