RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 ERFP50548 548 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 ADPRHP54922 357 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 UFM1P61960 85 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 HMGCS1Q01581 520 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 EMX2Q04743 252 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 GRSF1Q12849 480 aaKnown RBP eCLIP13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 RPS6KA2Q15349 733 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 NR6A1Q15406 480 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 ZRSR2Q15696 482 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 AP5B1Q2VPB7 878 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 VPS26BQ4G0F5 336 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 GGTA1PQ4G0N0 100 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 SGO1Q5FBB7 561 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 PIGGQ5H8A4 983 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 AGTRAPQ6RW13 159 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 L3MBTL4Q8NA19 623 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 OR4K3Q96R72 315 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 SLC29A3Q9BZD2 475 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 C8orf33Q9H7E9 229 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 ZNF490Q9ULM2 529 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 LRRK1Q38SD2 2015 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 A0A1W2PQU0 124 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 MAPK9P45984 424 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 RPS21P63220 83 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 IRX1P78414 480 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 GRIK2Q13002 908 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 NAE1Q13564 534 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 CEACAM7Q14002 265 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 ZNF423Q2M1K9 1284 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 MMEL1Q495T6 779 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 PDCD4Q53EL6 469 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 C8orf82Q6P1X6 216 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 BLOC1S3Q6QNY0 202 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 BNC2Q6ZN30 1099 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 THOC6Q86W42 341 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 KLHDC8AQ8IYD2 350 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 FBXO15Q8NCQ5 510 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 PPFIBP2Q8ND30 876 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 HM13Q8TCT9 377 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 FOPNLQ96NB1 174 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 OR52A5Q9H2C5 316 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 DPEP2Q9H4A9 486 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 DCLRE1BQ9H816 532 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 FBRSQ9HAH7 460 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 NDE1Q9NXR1 346 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 MAP10Q9P2G4 905 aa13.31□□□□□ -0.28
SPTBN1-205ENST00000496323 CKAP5Q14008 2032 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 TMEM265A0A087WTH1 108 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 MRASO14807 208 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 MBTPS2O43462 519 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 NARSO43776 548 aaKnown RBP13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 PSMG1O95456 288 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 FUCA1P04066 466 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 TEAD1P28347 426 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 IL12AP29459 219 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 THOP1P52888 689 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 PSME3P61289 254 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 TRMT11Q7Z4G4 463 aaKnown RBP13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 RGL4Q8IZJ4 473 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 OR56A3Q8NH54 315 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 ATL1Q8WXF7 558 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 DNASE1L2Q92874 299 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 MTFMTQ96DP5 389 aaKnown RBP13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 ZDHHC5Q9C0B5 715 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 ACTL8Q9H568 366 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 WDR26Q9H7D7 661 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 COL4A2P08572 1712 aa13.3□□□□□ -0.28
SPTBN1-205ENST00000496323 SLC28A1O00337 649 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 ANKRD28O15084 1053 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 RNGTTO60942 597 aaKnown RBP13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 SLC22A3O75751 556 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 PDYNP01213 254 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 C7P10643 843 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 G6PDP11413 515 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 CD22P20273 847 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 NEK2P51955 445 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 MRPS21P82921 87 aaKnown RBP13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 PLOD1Q02809 727 aaPredicted RBP13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 CCNIQ14094 377 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 RCAN2Q14206 197 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 RCN1Q15293 331 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 C6orf163Q5TEZ5 329 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 IL23RQ5VWK5 629 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 LAYNQ6UX15 382 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 TMEM92Q6UXU6 159 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 AMZ2Q86W34 360 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 PROKR1Q8TCW9 393 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 ZNF480Q8WV37 535 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 MRGPRX1Q96LB2 322 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 PPP3R2Q96LZ3 170 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 SLC17A9Q9BYT1 436 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 ACPTQ9BZG2 426 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 CD93Q9NPY3 652 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 ASPDHA6ND91 283 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 E7ENX8 843 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 RGS14O43566 566 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 KRT6AP02538 564 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 KRT6BP04259 564 aa13.29□□□□□ -0.28
SPTBN1-205ENST00000496323 KRT6CP48668 564 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms