RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 SMAPO00193 183 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 S1PR4O95977 384 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 RECKO95980 971 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 NTRK1P04629 796 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 SFTPCP11686 197 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 TCN2P20062 427 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 CD9P21926 228 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 ATP5DP30049 168 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 PKLRP30613 574 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 CCNFP41002 786 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 LY6DQ14210 128 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 TBR1Q16650 682 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 LINC00303Q3SY05 128 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 ZNF470Q6ECI4 717 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 KLHL7Q8IXQ5 586 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 RAB42Q8N4Z0 105 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.48■□□□□ 0.23
COMMD3-214ENST00000496071 SKA2Q8WVK7 121 aaPredicted RBP16.48■□□□□ 0.23
COMMD3-214ENST00000496071 STARD8Q92502 1023 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 LRFN5Q96NI6 719 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 TRIM56Q9BRZ2 755 aaKnown RBP16.48■□□□□ 0.23
COMMD3-214ENST00000496071 FAM117AQ9C073 453 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 CCDC68Q9H2F9 335 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 C20orf96Q9NUD7 363 aaPredicted RBP16.48■□□□□ 0.23
COMMD3-214ENST00000496071 SPHK1Q9NYA1 384 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 SLC39A10Q9ULF5 831 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 PLAGL1Q9UM63 463 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 PCDHGA6Q9Y5G7 932 aa16.48■□□□□ 0.23
COMMD3-214ENST00000496071 A0A0J9YY10 115 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 TMEM150CB9EJG8 249 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 RASGRF2O14827 1237 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 NKX2-8O15522 239 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 NIPSNAP2O75323 286 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 TTC4O95801 387 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 PRB1P04280 392 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 KLK3P07288 261 aaPredicted RBP16.47■□□□□ 0.23
COMMD3-214ENST00000496071 PVRP15151 417 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 PGAM1P18669 254 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 IVDP26440 423 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 DR1Q01658 176 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 GBX1Q14549 363 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 IZUMO3Q5VZ72 239 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 BORAQ6PGQ7 559 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 AGGF1Q8N302 714 aaeCLIP16.47■□□□□ 0.23
COMMD3-214ENST00000496071 ZBTB2Q8N680 514 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 C19orf47Q8N9M1 422 aaKnown RBP16.47■□□□□ 0.23
COMMD3-214ENST00000496071 OR2L8Q8NGY9 312 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 FLVCR1-AS1Q8TAF5 88 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 N4BP2L2Q92802 583 aaPredicted RBP16.47■□□□□ 0.23
COMMD3-214ENST00000496071 FAM167BQ9BTA0 163 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 MENTQ9BUN1 341 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 GPR87Q9BY21 358 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 IL1RAPL1Q9NZN1 696 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 KLHL42Q9P2K6 505 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 COMMD10Q9Y6G5 202 aa16.47■□□□□ 0.23
COMMD3-214ENST00000496071 TERTO14746 1132 aaKnown RBP16.46■□□□□ 0.23
COMMD3-214ENST00000496071 FKBP9O95302 570 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 C1orf105O95561 183 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 HBQ1P09105 142 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 ITGA1P56199 1179 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 CDC20Q12834 499 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 CTBP1Q13363 440 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 DNASE1L3Q13609 305 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 GRB7Q14451 532 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 MORF4L2Q15014 288 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 TTLL9Q3SXZ7 439 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 CDHR3Q6ZTQ4 885 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 DENND6AQ8IWF6 608 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 GPR135Q8IZ08 494 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 OR1L3Q8NH93 324 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 SEC14L1Q92503 715 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 RNF31Q96EP0 1072 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 EBNA1BP2Q99848 306 aaKnown RBP16.46■□□□□ 0.23
COMMD3-214ENST00000496071 KLHL25Q9H0H3 589 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 FBXO5Q9UKT4 447 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 NFS1Q9Y697 457 aa16.46■□□□□ 0.23
COMMD3-214ENST00000496071 LOC400499M0QZD8 3231 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 E7EQ34 232 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 NDC80O14777 642 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 KATNA1O75449 491 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 C1QL1O75973 258 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 MATN4O95460 622 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 CYP2A7P20853 494 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 F8A1P23610 371 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 PEBP1P30086 187 aaKnown RBP16.45■□□□□ 0.22
COMMD3-214ENST00000496071 CCR10P46092 362 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 RPS15P62841 145 aaKnown RBP16.45■□□□□ 0.22
COMMD3-214ENST00000496071 DHX9Q08211 1270 aaKnown RBP16.45■□□□□ 0.22
COMMD3-214ENST00000496071 ZNF789Q5FWF6 425 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 SPANXN3Q5MJ09 141 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 C16orf46Q6P387 395 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 CNSTQ6PJW8 725 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 NEK10Q6ZWH5 1172 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 TRIM73Q86UV7 250 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 KCNMB4Q86W47 210 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 PDIK1LQ8N165 341 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 ZNF843Q8N446 348 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 EXD3Q8N9H8 876 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 LINC01555Q8NAE3 123 aa16.45■□□□□ 0.22
COMMD3-214ENST00000496071 CT55Q8WUE5 264 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms