RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 MRPS18BQ9Y676 258 aaKnown RBP16.7■□□□□ 0.26
CTNS-207ENST00000495445 C21orf140B9A014 251 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 FANCGO15287 622 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 PRICKLE3O43900 615 aaPredicted RBP16.69■□□□□ 0.26
CTNS-207ENST00000495445 CPNE3O75131 537 aaKnown RBP16.69■□□□□ 0.26
CTNS-207ENST00000495445 SCRG1O75711 98 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 MATN4O95460 622 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 C1orf105O95561 183 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 RPN2P04844 631 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 CD9P21926 228 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 ATP5DP30049 168 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 TMED2Q15363 201 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 PPP1R7Q15435 360 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 PRAMEF17Q5VTA0 474 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 BORAQ6PGQ7 559 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 OTOAQ7RTW8 1153 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 HOOK3Q86VS8 718 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 DCUN1D3Q8IWE4 304 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 CFAP61Q8NHU2 1237 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 CT55Q8WUE5 264 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 ZNF669Q96BR6 464 aaPredicted RBP16.69■□□□□ 0.26
CTNS-207ENST00000495445 TCTN2Q96GX1 697 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 GPR87Q9BY21 358 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 FAM117AQ9C073 453 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 GEMIN8Q9NWZ8 242 aaKnown RBP16.69■□□□□ 0.26
CTNS-207ENST00000495445 IL1RAPL1Q9NZN1 696 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 KLHL42Q9P2K6 505 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 SERTAD3Q9UJW9 196 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 VPS9D1Q9Y2B5 631 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 MED16Q9Y2X0 877 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 SAR1BQ9Y6B6 198 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 FAM169AQ9Y6X4 670 aa16.69■□□□□ 0.26
CTNS-207ENST00000495445 SEC16AO15027 2179 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 A0A0J9YY10 115 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 RASGRF2O14827 1237 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 HCRTR1O43613 425 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 NIPSNAP2O75323 286 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 PKMP14618 531 aaKnown RBP16.68■□□□□ 0.26
CTNS-207ENST00000495445 TCN2P20062 427 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 OAS2P29728 719 aaKnown RBP16.68■□□□□ 0.26
CTNS-207ENST00000495445 RORAP35398 523 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 CDC20Q12834 499 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 GPS2Q13227 327 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 LONRF1Q17RB8 773 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 FAM199XQ6PEV8 388 aaPredicted RBP16.68■□□□□ 0.26
CTNS-207ENST00000495445 PCGF5Q86SE9 256 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 TRIM73Q86UV7 250 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 TMEM126BQ8IUX1 230 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 LMNTD2Q8IXW0 634 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 DNAJC22Q8N4W6 341 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 OTUD6BQ8N6M0 293 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 C19orf47Q8N9M1 422 aaKnown RBP16.68■□□□□ 0.26
CTNS-207ENST00000495445 OR2L8Q8NGY9 312 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 HMGCLL1Q8TB92 370 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 NAPGQ99747 312 aaPredicted RBP16.68■□□□□ 0.26
CTNS-207ENST00000495445 KLHL25Q9H0H3 589 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 FANCEQ9HB96 536 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 STARD5Q9NSY2 213 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 NFS1Q9Y697 457 aa16.68■□□□□ 0.26
CTNS-207ENST00000495445 GCN1Q92616 2671 aaKnown RBP16.67■□□□□ 0.26
CTNS-207ENST00000495445 TMEM150CB9EJG8 249 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 MAP3K7O43318 606 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 FURINP09958 794 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 FAM87AP0C7U9 286 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 SFTPCP11686 197 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 CLCN7P51798 805 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 CTBP1Q13363 440 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 DNASE1L3Q13609 305 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 MSS51Q4VC12 460 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 IZUMO3Q5VZ72 239 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 ZNF549Q6P9A3 640 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 SYDE1Q6ZW31 735 aaPredicted RBP16.67■□□□□ 0.26
CTNS-207ENST00000495445 DENND6AQ8IWF6 608 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 DSELQ8IZU8 1212 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 RAD51AP1Q96B01 352 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 ARHGAP9Q9BRR9 750 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 ADNPQ9H2P0 1102 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 RNF14Q9UBS8 474 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 MRFAP1Q9Y605 127 aa16.67■□□□□ 0.26
CTNS-207ENST00000495445 ISM1B1AKI9 464 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 B8ZZF3 427 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 MEN1O00255 615 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 CREG1O75629 220 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 CAPN1P07384 714 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 PRKAR1AP10644 381 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 CHRM3P20309 590 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 CCNFP41002 786 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 ITGA1P56199 1179 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 THOC5Q13769 683 aaKnown RBP16.66■□□□□ 0.26
CTNS-207ENST00000495445 CCSMST1Q4G0I0 132 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 ACSBG2Q5FVE4 666 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 ZNF385CQ66K41 422 aaPredicted RBP16.66■□□□□ 0.26
CTNS-207ENST00000495445 ZNF470Q6ECI4 717 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 LCN10Q6JVE6 187 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 LMNTD1Q8N9Z9 388 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 CALML6Q8TD86 181 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 DENND1AQ8TEH3 1009 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 SLC22A18Q96BI1 424 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 CAPZA3Q96KX2 299 aa16.66■□□□□ 0.26
CTNS-207ENST00000495445 RUNDC3BQ96NL0 473 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms