RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 S1PR4O95977 384 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 CD9P21926 228 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 DLSTP36957 453 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 SLC1A2P43004 574 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 CTBP1Q13363 440 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 CRYMQ14894 314 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 SLC5A12Q1EHB4 618 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 BBS9Q3SYG4 887 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 HSP90AA5PQ58FG0 334 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 DENND6AQ8IWF6 608 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 UNC5BQ8IZJ1 945 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 C19orf47Q8N9M1 422 aaKnown RBP17.06■□□□□ 0.32
HDAC4-211ENST00000494800 TTC9Q92623 222 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 FAM136AQ96C01 138 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 SNF8Q96H20 258 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 CATSPER2Q96P56 530 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 BBC3Q96PG8 261 aaPredicted RBP17.06■□□□□ 0.32
HDAC4-211ENST00000494800 OR2A14Q96R47 310 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 SLC7A5P2Q9GIP4 190 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 FBXO6Q9NRD1 293 aaPredicted RBP17.06■□□□□ 0.32
HDAC4-211ENST00000494800 PCDHB3Q9Y5E6 796 aa17.06■□□□□ 0.32
HDAC4-211ENST00000494800 PIKFYVEQ9Y2I7 2098 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 TMEM150CB9EJG8 249 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 RASGRF2O14827 1237 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 TTI1O43156 1089 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 NTRK1P04629 796 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 KLK3P07288 261 aaPredicted RBP17.05■□□□□ 0.32
HDAC4-211ENST00000494800 WT1P19544 449 aaPredicted RBP17.05■□□□□ 0.32
HDAC4-211ENST00000494800 CYP2A7P20853 494 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 ARL4CP56559 192 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 HIF1AQ16665 826 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 CNSTQ6PJW8 725 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 GPR135Q8IZ08 494 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 BBOF1Q8ND07 529 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 OR2L8Q8NGY9 312 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 STARD8Q92502 1023 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 KCNJ9Q92806 393 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 LRRC39Q96DD0 335 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 KRT12Q99456 494 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 NRTNQ99748 197 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 SLC12A9Q9BXP2 914 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 KLHL25Q9H0H3 589 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 LHX9Q9NQ69 397 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 FAM114A2Q9NRY5 505 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 IARS2Q9NSE4 1012 aaKnown RBP17.05■□□□□ 0.32
HDAC4-211ENST00000494800 INTS7Q9NVH2 962 aaKnown RBP17.05■□□□□ 0.32
HDAC4-211ENST00000494800 SPHK1Q9NYA1 384 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.05■□□□□ 0.32
HDAC4-211ENST00000494800 KLHL42Q9P2K6 505 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 CROTQ9UKG9 612 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 FBXO5Q9UKT4 447 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 AHCTF1Q8WYP5 2266 aa17.05■□□□□ 0.32
HDAC4-211ENST00000494800 EFCAB8A8MWE9 144 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 C21orf140B9A014 251 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 E7EQ34 232 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 VPS26AO75436 327 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 TIAF1O95411 115 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 C1orf105O95561 183 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 HBQ1P09105 142 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 TPBGLP0DKB5 382 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 PVRP15151 417 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 TCN2P20062 427 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 IVDP26440 423 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 ITGA1P56199 1179 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 ETF1P62495 437 aaKnown RBP17.04■□□□□ 0.32
HDAC4-211ENST00000494800 UGT3A1Q6NUS8 523 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 HIBCHQ6NVY1 386 aaPredicted RBP17.04■□□□□ 0.32
HDAC4-211ENST00000494800 MAATS1Q7Z4T9 603 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 AGGF1Q8N302 714 aaeCLIP17.04■□□□□ 0.321e-9■■■■□ 24.6
HDAC4-211ENST00000494800 CLIP3Q96DZ5 547 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 TRIM51Q9BSJ1 452 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 TRIM31Q9BZY9 425 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 CHRNA10Q9GZZ6 450 aa17.04■□□□□ 0.32
HDAC4-211ENST00000494800 PPANQ9NQ55 473 aaKnown RBP17.04■□□□□ 0.32
HDAC4-211ENST00000494800 KATNA1O75449 491 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 SEC31AO94979 1220 aaKnown RBP17.03■□□□□ 0.32
HDAC4-211ENST00000494800 FKBP9O95302 570 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 CATP04040 527 aaKnown RBP17.03■□□□□ 0.32
HDAC4-211ENST00000494800 SFTPCP11686 197 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 ENO3P13929 434 aaPredicted RBP17.03■□□□□ 0.32
HDAC4-211ENST00000494800 ITGA8P53708 1063 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 CYP4F2P78329 520 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 SF1Q15637 639 aaKnown RBP17.03■□□□□ 0.32
HDAC4-211ENST00000494800 CRTC2Q53ET0 693 aaPredicted RBP17.03■□□□□ 0.32
HDAC4-211ENST00000494800 ZNF789Q5FWF6 425 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 BORAQ6PGQ7 559 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 CDHR3Q6ZTQ4 885 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 KIAA0408Q6ZU52 694 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 NEK10Q6ZWH5 1172 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 TRIM73Q86UV7 250 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 SEC14L1Q92503 715 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 EXTL1Q92935 676 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 RNF31Q96EP0 1072 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 SPATA7Q9P0W8 599 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 ZC3H7BQ9UGR2 993 aaKnown RBP17.03■□□□□ 0.32
HDAC4-211ENST00000494800 CIDEBQ9UHD4 219 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 TSR3Q9UJK0 312 aaKnown RBP17.03■□□□□ 0.32
HDAC4-211ENST00000494800 NFS1Q9Y697 457 aa17.03■□□□□ 0.32
HDAC4-211ENST00000494800 IGSF10Q6WRI0 2623 aa17.02■□□□□ 0.32
HDAC4-211ENST00000494800 LOC400499M0QZD8 3231 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms