RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PARGQ86W56 976 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 GAS2L3Q86XJ1 694 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 SLC35F3Q8IY50 421 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 ZNF683Q8IZ20 524 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 SDR16C5Q8N3Y7 309 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 SLC16A11Q8NCK7 471 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 WDR36Q8NI36 951 aaKnown RBP5.18□□□□□ -1.58
PTCD3-219ENST00000494323 POC1BQ8TC44 478 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 MUL1Q969V5 352 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CENPTQ96BT3 561 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 LRRC46Q96FV0 321 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 PPP1R16AQ96I34 528 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 BOD1Q96IK1 185 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 C1orf74Q96LT6 269 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CCNL2Q96S94 520 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-219ENST00000494323 NPY6RQ99463 290 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CCDC3Q9BQI4 270 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 MESP1Q9BRJ9 268 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 TEX101Q9BY14 249 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 TM6SF2Q9BZW4 377 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 MS4A7Q9GZW8 240 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CLPBQ9H078 707 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 RAB6CQ9H0N0 254 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 ZDHHC6Q9H6R6 413 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 USP29Q9HBJ7 922 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 NECTIN3Q9NQS3 549 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 MBNL1Q9NR56 388 aaKnown RBP5.18□□□□□ -1.58
PTCD3-219ENST00000494323 ASNSD1Q9NWL6 643 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 ARHGEF38Q9NXL2 777 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CTTNBP2NLQ9P2B4 639 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 SPASTQ9UBP0 616 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 IL17BQ9UHF5 180 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CAPN11Q9UMQ6 739 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 ITM2BQ9Y287 266 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 ATP6V1DQ9Y5K8 247 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 NOX1Q9Y5S8 564 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 CSNK1G3Q9Y6M4 447 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 ARHGEF17Q96PE2 2063 aaPredicted RBP5.18□□□□□ -1.58
PTCD3-219ENST00000494323 COL12A1Q99715 3063 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 PTPN13Q12923 2485 aa5.18□□□□□ -1.58
PTCD3-219ENST00000494323 PRAMEF33A0A0G2JMD5 474 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 A0A1W2PQM1 296 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 BICDL2A1A5D9 508 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 ILVBLA1L0T0 632 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 CCDC78A2IDD5 438 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 LMO7DNF2Z398 122 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 GOLGA8SH3BPF8 625 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 M0R3H8 397 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 TOR1BO14657 336 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 PRAMEF10O60809 474 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 DAB1O75553 588 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 NCR1O76036 304 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 POP4O95707 220 aaKnown RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 GNA14O95837 355 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 UGT2B4P06133 528 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 ELANEP08246 267 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 PNMA6AP0CW24 399 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 BTF3P20290 206 aaKnown RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 ACVR2AP27037 513 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 PON1P27169 355 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 UGT1A5P35504 534 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 SERPINF1P36955 418 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 ACVRL1P37023 503 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 CCT5P48643 541 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 SERPINH1P50454 418 aaKnown RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 CSRP3P50461 194 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 ANXA11P50995 505 aaKnown RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 PDX1P52945 283 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 SNX16P57768 344 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 PFN3P60673 137 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 CYP4F2P78329 520 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 ARF5P84085 180 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 GNA12Q03113 381 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 PPARDQ03181 441 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 SLC20A2Q08357 652 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 PTK2BQ14289 1009 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 SPARCL1Q14515 664 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 IQCB1Q15051 598 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 MYLK3Q32MK0 819 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 BEAN1Q3B7T3 259 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 PTPN20Q4JDL3 420 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 ZNF805Q5CZA5 627 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 BRMS1LQ5PSV4 323 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 B3GNTL1Q67FW5 361 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 KIAA1161Q6NSJ0 714 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 KYAT3Q6YP21 454 aaKnown RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 USP51Q70EK9 711 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 PARS2Q7L3T8 475 aaKnown RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 ENOSF1Q7L5Y1 443 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 RAB11FIP2Q7L804 512 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 SLC26A9Q7LBE3 791 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 PHLDB2Q86SQ0 1253 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 ZNF354CQ86Y25 554 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 SFTPA2Q8IWL1 248 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 FBXO39Q8N4B4 442 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 Q8N9G6 341 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 DCAF4L2Q8NA75 395 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 Q8NA96 180 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 ATG16L2Q8NAA4 619 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms