RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 RAB43Q86YS6 212 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 FAM20CQ8IXL6 584 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 C19orf47Q8N9M1 422 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 DENND1AQ8TEH3 1009 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 MAIP1Q8WWC4 291 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 ASZ1Q8WWH4 475 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 PEX13Q92968 403 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 SLC22A18Q96BI1 424 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 OR2A14Q96R47 310 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 DHRS4Q9BTZ2 278 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 MENTQ9BUN1 341 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 LZTFL1Q9NQ48 299 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 CHRAC1Q9NRG0 131 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 PCMTD2Q9NV79 361 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 ZNF451Q9Y4E5 1061 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 PCDHGB7Q9Y5F8 929 aa12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 PCDHGA9Q9Y5G4 932 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-212ENST00000494067 KRT87PA6NCN2 255 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 TTLL8A6PVC2 850 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 VPS4BO75351 444 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 IGHEP01854 428 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 CHRM5P08912 532 aaPredicted RBP12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 UGT2B7P16662 529 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 ARNTP27540 789 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 FOXL2P58012 376 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 HSPA14Q0VDF9 509 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 CHAF1BQ13112 559 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 GRB7Q14451 532 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 KIR2DS3Q14952 304 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 NCF4Q15080 339 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 PCID2Q5JVF3 399 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 ZNF385CQ66K41 422 aaPredicted RBP12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 TLDC1Q6P9B6 456 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 GSTA5Q7RTV2 222 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 HPS6Q86YV9 775 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 KRT222Q8N1A0 295 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 RAB42Q8N4Z0 105 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 TMEM102Q8N9M5 508 aaPredicted RBP12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 LINC01555Q8NAE3 123 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 SGSM3Q96HU1 749 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 IP6K3Q96PC2 410 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 PANX3Q96QZ0 392 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 CHRNA10Q9GZZ6 450 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 TXLNGQ9NUQ3 528 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 NDOR1Q9UHB4 597 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 VPS4AQ9UN37 437 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 SRPK3Q9UPE1 567 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 MRFAP1Q9Y605 127 aa12.93□□□□□ -0.34
CTDSP1-212ENST00000494067 A0A0J9YY10 115 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 PEX12O00623 359 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 KPNA5O15131 536 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 PFDN6O15212 129 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 KLHL41O60662 606 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 DPM1O60762 260 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 F7P08709 466 aaPredicted RBP12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 NMBRP28336 390 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 CXCR5P32302 372 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 PTGIRP43119 386 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 TTPAP49638 278 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 SESN2P58004 480 aaPredicted RBP12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 UBAP2LQ14157 1087 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 CCNG2Q16589 344 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 SLC5A12Q1EHB4 618 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 PTCHD3Q3KNS1 767 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 MLIPQ5VWP3 458 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 PTRHD1Q6GMV3 140 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 CES3Q6UWW8 571 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 PROKR1Q8TCW9 393 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 ADAMTS17Q8TE56 1095 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 TRIM56Q9BRZ2 755 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 NDC1Q9BTX1 674 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 CARD6Q9BX69 1037 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 AP1M1Q9BXS5 423 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 TREX1Q9NSU2 369 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 CATSPERZQ9NTU4 200 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 INTS7Q9NVH2 962 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 BFARQ9NZS9 450 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 SLC39A10Q9ULF5 831 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 PLCL2Q9UPR0 1127 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 KLHL20Q9Y2M5 609 aa12.92□□□□□ -0.34
CTDSP1-212ENST00000494067 MED13Q9UHV7 2174 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 CCDC88CQ9P219 2028 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 NRDCO43847 1150 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 GPC4O75487 556 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 FGGP02679 453 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 VARSP26640 1264 aaKnown RBP12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 FOLR3P41439 243 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 NPY2RP49146 381 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 RAB28P51157 221 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 TERF1P54274 439 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 MLLT10P55197 1068 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 BASP1P80723 227 aaKnown RBP12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 DCDP81605 110 aaKnown RBP12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 SSPNQ14714 243 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 TTC27Q6P3X3 843 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 DRICH1Q6PGQ1 229 aaPredicted RBP12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 ZNF662Q6ZS27 426 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 DCUN1D3Q8IWE4 304 aa12.91□□□□□ -0.34
CTDSP1-212ENST00000494067 LRRC8AQ8IWT6 810 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms