RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 KLHL20Q9Y2M5 609 aa9.42□□□□□ -0.9
UFD1-210ENST00000494054 PPP2R2CQ9Y2T4 447 aa9.42□□□□□ -0.9
UFD1-210ENST00000494054 ASH1LQ9NR48 2969 aaKnown RBP9.41□□□□□ -0.9
UFD1-210ENST00000494054 A0A0J9YY10 115 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 ARGFXA6NJG6 315 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 ISM1B1AKI9 464 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 GOLGA8KD6RF30 607 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 E7EQ34 232 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 MKRN2OSH3BPM6 223 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 GOLGA8TH3BQL2 631 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 MAP3K7O43318 606 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 AVILO75366 819 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 SLCO2B1O94956 709 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 VAPBO95292 243 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 CBSLP0DN79 551 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 TPSB2P20231 275 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 CD9P21926 228 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 PKLRP30613 574 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 CBSP35520 551 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 PPARGP37231 505 aaPredicted RBP9.41□□□□□ -0.9
UFD1-210ENST00000494054 TTPAP49638 278 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 VPS41P49754 854 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 RAB28P51157 221 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 KCNJ11Q14654 390 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 TPSAB1Q15661 275 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 IGFBP7Q16270 282 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 CCSMST1Q4G0I0 132 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 DNAJC21Q5F1R6 531 aaKnown RBP9.41□□□□□ -0.9
UFD1-210ENST00000494054 AARS2Q5JTZ9 985 aaKnown RBP9.41□□□□□ -0.9
UFD1-210ENST00000494054 CTSL3PQ5NE16 218 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 ANKRD22Q5VYY1 191 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 PTRHD1Q6GMV3 140 aaKnown RBP9.41□□□□□ -0.9
UFD1-210ENST00000494054 TCTN3Q6NUS6 607 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 LRRC8BQ6P9F7 803 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 C4orf22Q6V702 233 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 HOOK3Q86VS8 718 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 TMEM151BQ8IW70 566 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 MPP5Q8N3R9 675 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 DNAJC22Q8N4W6 341 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 THAP4Q8WY91 577 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 MFSD3Q96ES6 412 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 TCTN2Q96GX1 697 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 MS4A14Q96JA4 679 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 TRIM56Q9BRZ2 755 aaKnown RBP9.41□□□□□ -0.9
UFD1-210ENST00000494054 NLNQ9BYT8 704 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 CHRNA10Q9GZZ6 450 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 TCFL5Q9UL49 500 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 SNX7Q9UNH6 387 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 NBASA2RRP1 2371 aa9.41□□□□□ -0.9
UFD1-210ENST00000494054 SEC16AO15027 2179 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 UBR5O95071 2799 aaPredicted RBP9.4□□□□□ -0.9
UFD1-210ENST00000494054 KRT87PA6NCN2 255 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 F8W8V4 182 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 NDUFS3O75489 264 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 OR2B3O76000 313 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 APOA4P06727 396 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 RPS3P23396 243 aaKnown RBP eCLIP9.4□□□□□ -0.9
UFD1-210ENST00000494054 PTGIRP43119 386 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 CCL11P51671 97 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 KLRB1Q12918 225 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 GPS1Q13098 491 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 KIR2DS3Q14952 304 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 NCF4Q15080 339 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 SLC5A12Q1EHB4 618 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 C1orf189Q5VU69 101 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 UNC5DQ6UXZ4 953 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 ASB18Q6ZVZ8 466 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 TAX1BP1Q86VP1 789 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 CAND1Q86VP6 1230 aaKnown RBP9.4□□□□□ -0.9
UFD1-210ENST00000494054 SPNS2Q8IVW8 549 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 RASGEF1CQ8N431 466 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 ZBTB2Q8N680 514 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 SEC14L1Q92503 715 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 BIRC8Q96P09 236 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 TSSK1BQ9BXA7 367 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 SLC7A5P2Q9GIP4 190 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 ING2Q9H160 280 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 MRM3Q9HC36 420 aaKnown RBP9.4□□□□□ -0.9
UFD1-210ENST00000494054 HOMER3Q9NSC5 361 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 GALPQ9UBC7 116 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 SOX13Q9UN79 622 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 RUVBL2Q9Y230 463 aaKnown RBP9.4□□□□□ -0.9
UFD1-210ENST00000494054 NFS1Q9Y697 457 aa9.4□□□□□ -0.9
UFD1-210ENST00000494054 PCSK5Q92824 1860 aa9.4□□□□□ -0.91
UFD1-210ENST00000494054 MED13Q9UHV7 2174 aa9.4□□□□□ -0.91
UFD1-210ENST00000494054 SNRNP200O75643 2136 aaKnown RBP9.4□□□□□ -0.91
UFD1-210ENST00000494054 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
UFD1-210ENST00000494054 AP3B1O00203 1094 aa9.39□□□□□ -0.91
UFD1-210ENST00000494054 PRICKLE3O43900 615 aaPredicted RBP9.39□□□□□ -0.91
UFD1-210ENST00000494054 CNOT3O75175 753 aaKnown RBP9.39□□□□□ -0.91
UFD1-210ENST00000494054 NIPSNAP2O75323 286 aa9.39□□□□□ -0.91
UFD1-210ENST00000494054 KLF7O75840 302 aaPredicted RBP9.39□□□□□ -0.91
UFD1-210ENST00000494054 TMEM63AO94886 807 aa9.39□□□□□ -0.91
UFD1-210ENST00000494054 KRT14P02533 472 aa9.39□□□□□ -0.91
UFD1-210ENST00000494054 F7P08709 466 aaPredicted RBP9.39□□□□□ -0.91
UFD1-210ENST00000494054 HBQ1P09105 142 aa9.39□□□□□ -0.91
UFD1-210ENST00000494054 ATXN8OSP0DMR3 200 aa9.39□□□□□ -0.91
UFD1-210ENST00000494054 MAGP20916 626 aa9.39□□□□□ -0.91
UFD1-210ENST00000494054 FMO4P31512 558 aa9.39□□□□□ -0.91
UFD1-210ENST00000494054 MAGEA6P43360 314 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms