RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	ERVH48-1	M5A8F1	160 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	MAGEC1	O60732	1142 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	SRGAP2	O75044	1071 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	ENTPD5	O75356	428 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	HTR3B	O95264	441 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	NDUFA10	O95299	355 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	FABP1	P07148	127 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	C8B	P07358	591 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	TMEM253	P0C7T8	217 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	NDUFV2	P19404	249 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	MAGEA1	P43355	309 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	P2RY4	P51582	365 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	MAPK12	P53778	367 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	EIF3B	P55884	814 aa	Known RBP	11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	APOF	Q13790	326 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	PDK3	Q15120	406 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	EFHC2	Q5JST6	749 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	PTRHD1	Q6GMV3	140 aa	Known RBP	11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	FBXL22	Q6P050	247 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	GPRIN3	Q6ZVF9	776 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	GALNTL5	Q7Z4T8	443 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	NAXE	Q8NCW5	288 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	WFDC5	Q8TCV5	224 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	TESC	Q96BS2	214 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	PPP1R2P1	Q96PQ5	205 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	PRMT1	Q99873	361 aa	Known RBP	11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	TUBB6	Q9BUF5	446 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	CDADC1	Q9BWV3	514 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	TRIM2	Q9C040	744 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	TWSG1	Q9GZX9	223 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	PPA2	Q9H2U2	334 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	MAGEE1	Q9HCI5	957 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	OSGEP	Q9NPF4	335 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	ZDHHC4	Q9NPG8	344 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	CNOT11	Q9UKZ1	510 aa	Known RBP	11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	SNX13	Q9Y5W8	968 aa		11.36	□□□□□ -0.59
BRCA1-222	ENST00000493919	DMD	P11532	3685 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	GFRA2	O00451	464 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	TERT	O14746	1132 aa	Known RBP	11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	NUPL2	O15504	423 aa	Known RBP	11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	APOL3	O95236	402 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	PGM3	O95394	542 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	OPN1LW	P04000	364 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	HK1	P19367	917 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	PTPN4	P29074	926 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	AVPR2	P30518	371 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	OXTR	P30559	389 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	CDH6	P55285	790 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	DLG1	Q12959	904 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	PDSS1	Q5T2R2	415 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	HMBOX1	Q6NT76	420 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	OGFOD3	Q6PK18	319 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	RAD9B	Q6WBX8	426 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	ANKS1B	Q7Z6G8	1248 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	PDSS2	Q86YH6	399 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	ZNF687	Q8N1G0	1237 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	MARVELD2	Q8N4S9	558 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	FITM2	Q8N6M3	262 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	UBL4B	Q8N7F7	174 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	SLC37A3	Q8NCC5	494 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	ZNF398	Q8TD17	642 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	IGSF8	Q969P0	613 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	PPM1M	Q96MI6	270 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	NPHS2	Q9NP85	383 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	MRPS30	Q9NP92	439 aa	Known RBP	11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	PRDM9	Q9NQV7	894 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	ABCB8	Q9NUT2	735 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	GPATCH2L	Q9NWQ4	482 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	KLHL14	Q9P2G3	628 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	DAPK2	Q9UIK4	370 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	TFR2	Q9UP52	801 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	ATG2B	Q96BY7	2078 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919		A0A1B0GVM2	712 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	ANTXRL	A6NF34	631 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	TCAF2	A6NFQ2	919 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	ZNF487	B1APH4	448 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919		E9PAM4	449 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	TRIM38	O00635	465 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	PRPSAP2	O60256	369 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	LRCH4	O75427	683 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	PRDX6	P30041	224 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	SERPINB1	P30740	379 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	ADRA1B	P35368	520 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	GJC1	P36383	396 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	EIF2S3	P41091	472 aa	Known RBP	11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	MEOX2	P50222	304 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	C2orf27A	Q580R0	203 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	CDKL4	Q5MAI5	379 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	UBAP2	Q5T6F2	1119 aa	Known RBP	11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	WDR73	Q6P4I2	378 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	NUDT18	Q6ZVK8	323 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	TFAP2D	Q7Z6R9	452 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	METTL25	Q8N6Q8	603 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	CNTD1	Q8N815	330 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	SNX31	Q8N9S9	440 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	OR6Y1	Q8NGX8	325 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	RPLP0P6	Q8NHW5	317 aa		11.35	□□□□□ -0.59
BRCA1-222	ENST00000493919	RFFL	Q8WZ73	363 aa		11.35	□□□□□ -0.59

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