RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 TCAF1Q9Y4C2 921 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 CAPN6Q9Y6Q1 641 aa12.03□□□□□ -0.48
COL6A1-205ENST00000492851 OR51F1A6NGY5 319 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 K7EM74 188 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 PRMT5O14744 637 aaPredicted RBP12.02□□□□□ -0.49
COL6A1-205ENST00000492851 ZSCAN9O15535 394 aaPredicted RBP12.02□□□□□ -0.49
COL6A1-205ENST00000492851 DNAJB5O75953 348 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 S1PR4O95977 384 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 CAPN1P07384 714 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 PVRP15151 417 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 NR1D1P20393 614 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 CD9P21926 228 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 PTGIRP43119 386 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 ARSFP54793 590 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 KYNUQ16719 465 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 ZC3H12BQ5HYM0 836 aaKnown RBP12.02□□□□□ -0.49
COL6A1-205ENST00000492851 MEI1Q5TIA1 1274 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 YOD1Q5VVQ6 348 aaPredicted RBP12.02□□□□□ -0.49
COL6A1-205ENST00000492851 MLIPQ5VWP3 458 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 ARMC3Q5W041 872 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 MPP5Q8N3R9 675 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 SPC24Q8NBT2 197 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 GALNT11Q8NCW6 608 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 MAGEC3Q8TD91 643 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 C1orf54Q8WWF1 131 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 DLG3Q92796 817 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 PTERQ96BW5 349 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 NDC1Q9BTX1 674 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 RAB11FIP5Q9BXF6 653 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 IL22Q9GZX6 179 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 KLHL25Q9H0H3 589 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 EIF2B3Q9NR50 452 aaKnown RBP12.02□□□□□ -0.49
COL6A1-205ENST00000492851 CATSPERZQ9NTU4 200 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 IRAK4Q9NWZ3 460 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 BFARQ9NZS9 450 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 IFT80Q9P2H3 777 aaPredicted RBP12.02□□□□□ -0.49
COL6A1-205ENST00000492851 PLAAQ9Y263 795 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 BSNQ9UPA5 3926 aa12.02□□□□□ -0.49
COL6A1-205ENST00000492851 CLEC18AA5D8T8 446 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 CD3EAPO15446 510 aaKnown RBP12.01□□□□□ -0.49
COL6A1-205ENST00000492851 OR1I1O60431 355 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 GPC4O75487 556 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 IPO13O94829 963 aaKnown RBP12.01□□□□□ -0.49
COL6A1-205ENST00000492851 SLCO2B1O94956 709 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 ALPPP05187 535 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 CCR7P32248 378 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 FOLR3P41439 243 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 MLLT10P55197 1068 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 SARNPP82979 210 aaKnown RBP12.01□□□□□ -0.49
COL6A1-205ENST00000492851 CDK16Q00536 496 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 PTCHD3Q3KNS1 767 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 TCTE1Q5JU00 501 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 ZNF385CQ66K41 422 aaPredicted RBP12.01□□□□□ -0.49
COL6A1-205ENST00000492851 CPZQ66K79 652 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 PTRHD1Q6GMV3 140 aaKnown RBP12.01□□□□□ -0.49
COL6A1-205ENST00000492851 LCN10Q6JVE6 187 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 FAM198BQ6UWH4 519 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 CLEC18BQ6UXF7 455 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 ZNF662Q6ZS27 426 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 GSTA5Q7RTV2 222 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 SDCCAG8Q86SQ7 713 aaPredicted RBP12.01□□□□□ -0.49
COL6A1-205ENST00000492851 DCUN1D3Q8IWE4 304 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 DNAJC22Q8N4W6 341 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 ZBTB2Q8N680 514 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 CLEC1AQ8NC01 280 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 CLEC18CQ8NCF0 446 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 CPT1CQ8TCG5 803 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 ZUFSPQ96AP4 578 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 RAD51AP1Q96B01 352 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 VPS50Q96JG6 964 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 FOPNLQ96NB1 174 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 FAM60AQ9NP50 221 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 CHRAC1Q9NRG0 131 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 SPHK1Q9NYA1 384 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 GPR83Q9NYM4 423 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 IL1RAPL1Q9NZN1 696 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.01□□□□□ -0.49
COL6A1-205ENST00000492851 ANKMY1Q9P2S6 941 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 SLC2A6Q9UGQ3 507 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 GNPTGQ9UJJ9 305 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 SLC39A10Q9ULF5 831 aa12.01□□□□□ -0.49
COL6A1-205ENST00000492851 TARM1B6A8C7 271 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 H3BMH7 237 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 H3BMM5 538 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 ZNF185O15231 689 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 NDUFS3O75489 264 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 KLF7O75840 302 aaPredicted RBP12□□□□□ -0.49
COL6A1-205ENST00000492851 ALBP02768 609 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 PDGFAP04085 211 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 TPBGLP0DKB5 382 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 AOAHP28039 575 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 PKLRP30613 574 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 RPL22P35268 128 aaKnown RBP12□□□□□ -0.49
COL6A1-205ENST00000492851 CCNFP41002 786 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 GRIA1P42261 906 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 GABRA4P48169 554 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 SNX1Q13596 522 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 SF1Q15637 639 aaKnown RBP12□□□□□ -0.49
COL6A1-205ENST00000492851 FAM214AQ32MH5 1076 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 RNF187Q5TA31 235 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms