RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 E7EQ34 232 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 TERTO14746 1132 aaKnown RBP14.58□□□□□ -0.08
USP39-217ENST00000491659 NIPSNAP2O75323 286 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 USP1O94782 785 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 KLK3P07288 261 aaPredicted RBP14.58□□□□□ -0.08
USP39-217ENST00000491659 TPBGLP0DKB5 382 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 OAS2P29728 719 aaKnown RBP14.58□□□□□ -0.08
USP39-217ENST00000491659 MAGEA3P43357 314 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 ADARP55265 1226 aaKnown RBP14.58□□□□□ -0.08
USP39-217ENST00000491659 ITGA1P56199 1179 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 PTK6Q13882 451 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 SLC5A12Q1EHB4 618 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 CDHR3Q6ZTQ4 885 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 PCGF5Q86SE9 256 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 TMEM135Q86UB9 458 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 GPR135Q8IZ08 494 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 OR1L3Q8NH93 324 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 SLCO2A1Q92959 643 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 MR1Q95460 341 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 RAD51AP1Q96B01 352 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 CLIP3Q96DZ5 547 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 TCTN2Q96GX1 697 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 BIRC8Q96P09 236 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 NAPGQ99747 312 aaPredicted RBP14.58□□□□□ -0.08
USP39-217ENST00000491659 CCDC68Q9H2F9 335 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 ADNPQ9H2P0 1102 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 IL1RAPL1Q9NZN1 696 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 PCYOX1Q9UHG3 505 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 SERTAD3Q9UJW9 196 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 SLC39A10Q9ULF5 831 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 CRYL1Q9Y2S2 319 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 PCDHGA6Q9Y5G7 932 aa14.58□□□□□ -0.08
USP39-217ENST00000491659 DNALI1O14645 258 aaPredicted RBP14.57□□□□□ -0.08
USP39-217ENST00000491659 RASGRF2O14827 1237 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 PKMP14618 531 aaKnown RBP14.57□□□□□ -0.08
USP39-217ENST00000491659 CHRM3P20309 590 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 ATP5DP30049 168 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 PEBP1P30086 187 aaKnown RBP14.57□□□□□ -0.08
USP39-217ENST00000491659 CCNFP41002 786 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 BDKRB1P46663 353 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 POLE2P56282 527 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 RPS15P62841 145 aaKnown RBP14.57□□□□□ -0.08
USP39-217ENST00000491659 GPS2Q13227 327 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 LONRF1Q17RB8 773 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 DEFB109BQ30KR1 87 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 RNASEH2BQ5TBB1 312 aaKnown RBP14.57□□□□□ -0.08
USP39-217ENST00000491659 ATP1A1-AS1Q5TC04 95 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 CNSTQ6PJW8 725 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 CENPUQ71F23 418 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 ZNF605Q86T29 641 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 TAX1BP1Q86VP1 789 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 LMNTD2Q8IXW0 634 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 ZBTB2Q8N680 514 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 OR2L8Q8NGY9 312 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 FLVCR1-AS1Q8TAF5 88 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 CALML6Q8TD86 181 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 MAGEC3Q8TD91 643 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 SEC14L1Q92503 715 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 SLC22A18Q96BI1 424 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 FAM136AQ96C01 138 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 LRFN5Q96NI6 719 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 RUNDC3BQ96NL0 473 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 GPR87Q9BY21 358 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 ACTR5Q9H9F9 607 aaPredicted RBP14.57□□□□□ -0.08
USP39-217ENST00000491659 C20orf96Q9NUD7 363 aaPredicted RBP14.57□□□□□ -0.08
USP39-217ENST00000491659 CIDEBQ9UHD4 219 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 TSR3Q9UJK0 312 aaKnown RBP14.57□□□□□ -0.08
USP39-217ENST00000491659 SAR1BQ9Y6B6 198 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 COL6A6A6NMZ7 2263 aa14.57□□□□□ -0.08
USP39-217ENST00000491659 KALRNO60229 2985 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 ZCWPW2A0A1B0GU75 182 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 CDC14CA4D256 554 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 CREG1O75629 220 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 S1PR4O95977 384 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 HBQ1P09105 142 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 PGAM1P18669 254 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 CD9P21926 228 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 KCNAB2Q13303 367 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 ERV3-1Q14264 604 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 GRB7Q14451 532 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 DEFB110Q30KQ9 67 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 TTLL9Q3SXZ7 439 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 IZUMO3Q5VZ72 239 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 PAPD7Q5XG87 772 aaKnown RBP14.56□□□□□ -0.08
USP39-217ENST00000491659 FAM199XQ6PEV8 388 aaPredicted RBP14.56□□□□□ -0.08
USP39-217ENST00000491659 SYDE1Q6ZW31 735 aaPredicted RBP14.56□□□□□ -0.08
USP39-217ENST00000491659 DSELQ8IZU8 1212 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 LINC01555Q8NAE3 123 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.56□□□□□ -0.08
USP39-217ENST00000491659 SIGLEC10Q96LC7 697 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 IL17FQ96PD4 163 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 FAM167BQ9BTA0 163 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 MENTQ9BUN1 341 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 FAM117AQ9C073 453 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 TWSG1Q9GZX9 223 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 CHRNA10Q9GZZ6 450 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 ACTL8Q9H568 366 aa14.56□□□□□ -0.08
USP39-217ENST00000491659 FBXO6Q9NRD1 293 aaPredicted RBP14.56□□□□□ -0.08
USP39-217ENST00000491659 INTS7Q9NVH2 962 aaKnown RBP14.56□□□□□ -0.08
USP39-217ENST00000491659 IRAK4Q9NWZ3 460 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms