RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 L2HGDHQ9H9P8 463 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 LRRC4CQ9HCJ2 640 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 FBXO8Q9NRD0 319 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 FOXJ2Q9P0K8 574 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 CIDEBQ9UHD4 219 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 SLC39A10Q9ULF5 831 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 PCDHGA3Q9Y5H0 932 aa15.77■□□□□ 0.12
MSH5-SAPCD1-206ENST00000491552 ADAMTS20P59510 1910 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FAM159BA6NKW6 160 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ARHGEF33A8MVX0 844 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CXorf49A8MYA2 514 aaPredicted RBP15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CATP04040 527 aaKnown RBP15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 UGT2B7P16662 529 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FDXRP22570 491 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ARL4DP49703 201 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 RGS4P49798 205 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ILF2Q12905 390 aaKnown RBP15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PDAP1Q13442 181 aaKnown RBP15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CCSMST1Q4G0I0 132 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 DCAF12Q5T6F0 453 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ANKS6Q68DC2 871 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SPESP1Q6UW49 350 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 RAB42Q8N4Z0 105 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ZNF248Q8NDW4 579 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 OR2L8Q8NGY9 312 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PMEPA1Q969W9 287 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PPM1MQ96MI6 270 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 DCBLD2Q96PD2 775 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 IL17FQ96PD4 163 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 TEFMQ96QE5 360 aaKnown RBP15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 TWSG1Q9GZX9 223 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 RHOJQ9H4E5 214 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 C1GALT1Q9NS00 363 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SPHK1Q9NYA1 384 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SPATA7Q9P0W8 599 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 TXNDC16Q9P2K2 825 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ACSL6Q9UKU0 697 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 VWA7Q9Y334 891 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FRYQ5TBA9 3013 aa15.76■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ASPMQ8IZT6 3477 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FAM95CA0A1B0GW59 222 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SRRM3A6NNA2 597 aaPredicted RBP15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 POLR1CO15160 346 aaPredicted RBP15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ZNF500O60304 480 aaPredicted RBP15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PIAS1O75925 651 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ZBTB11O95625 1053 aaPredicted RBP15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 RHOXF2BP0C7M4 288 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CD82P27701 267 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ECHS1P30084 290 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PEBP1P30086 187 aaKnown RBP15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 EIF2S3P41091 472 aaKnown RBP15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SH3BP2P78314 561 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 HSD11B2P80365 405 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FOXM1Q08050 763 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 KIR2DS3Q14952 304 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CYB5D1Q6P9G0 228 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FBXO38Q6PIJ6 1188 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PAQR3Q6TCH7 311 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CEACAM20Q6UY09 585 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CYHR1Q6ZMK1 362 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PIWIL4Q7Z3Z4 852 aaKnown RBP15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 LINC01555Q8NAE3 123 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 LRRN4CLQ8ND94 238 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FBF1Q8TES7 1133 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 EEF1AKMT1Q8WVE0 214 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ASB11Q8WXH4 323 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 OR2A14Q96R47 310 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 OLFM1Q99784 485 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CPNE1Q99829 537 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CTRCQ99895 268 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 RHOXF2Q9BQY4 288 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 MCMBPQ9BTE3 642 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PITPNM3Q9BZ71 974 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ASPSCR1Q9BZE9 553 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 APMAPQ9HDC9 416 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SOHLH2Q9NX45 425 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 PCDHB11Q9Y5F2 797 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 B3GALT1Q9Y5Z6 326 aa15.75■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CHD8Q9HCK8 2581 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 KRT87PA6NCN2 255 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SLC9B1P1A6NJY1 282 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ISM1B1AKI9 464 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 MYO1CO00159 1063 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 RRP8O43159 456 aaKnown RBP15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 C1QAP02745 245 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 ST6GAL1P15907 406 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 NAB1Q13506 487 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 KCNAB1Q14722 419 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 SLC5A12Q1EHB4 618 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 KBTBD12Q3ZCT8 623 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 LRRC69Q6ZNQ3 347 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 TRIM73Q86UV7 250 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 RELL1Q8IUW5 271 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 RASGRP3Q8IV61 690 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 CTAGE3PQ8IX95 158 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 IFT20Q8IY31 132 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 MYO1HQ8N1T3 1032 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 D2HGDHQ8N465 521 aa15.74■□□□□ 0.11
MSH5-SAPCD1-206ENST00000491552 FBXO15Q8NCQ5 510 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms