RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 SNX7Q9UNH6 387 aa8.19□□□□□ -1.1
PCOLCE-209ENST00000490909 FARSAQ9Y285 508 aaKnown RBP8.19□□□□□ -1.1
PCOLCE-209ENST00000490909 ARL5AQ9Y689 179 aa8.19□□□□□ -1.1
PCOLCE-209ENST00000490909 TACC2O95359 2948 aa8.19□□□□□ -1.1
PCOLCE-209ENST00000490909 UBA6A0AVT1 1052 aaPredicted RBP8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 SLC9B1P1A6NJY1 282 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 TMEM150CB9EJG8 249 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 H3BMH7 237 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 MEN1O00255 615 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 BTN3A3O00478 584 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 BTN3A1O00481 513 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 TTI1O43156 1089 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 RAD51CO43502 376 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 CNOT3O75175 753 aaKnown RBP8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 CRTAMO95727 393 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 RAB40ALP0C0E4 278 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 ZSCAN5DPP0CG00 497 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 ETS1P14921 441 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 PVRP15151 417 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 POLR2CP19387 275 aaPredicted RBP8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 AKT1P31749 480 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 DCTP40126 519 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 RPS15P62841 145 aaKnown RBP8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 XIAPP98170 497 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 C2orf54Q08AI8 447 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 KCNJ11Q14654 390 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 NCF4Q15080 339 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 TRIP13Q15645 432 aaPredicted RBP8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 BCL7AQ4VC05 210 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 DUPD1Q68J44 220 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 LRRC8BQ6P9F7 803 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 MRGPREQ86SM8 312 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 NAT8LQ8N9F0 302 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 EIF1ADQ8N9N8 165 aaKnown RBP8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 DNAAF3Q8N9W5 541 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 GLIS1Q8NBF1 620 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 OR2L2Q8NH16 312 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 BRSK1Q8TDC3 778 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 SEC14L1Q92503 715 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 CPT1BQ92523 772 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 LRRC39Q96DD0 335 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 RANBP9Q96S59 729 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 SMAD5Q99717 465 aaKnown RBP8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 FICDQ9BVA6 458 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 CARD6Q9BX69 1037 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 NLNQ9BYT8 704 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 PHACTR1Q9C0D0 580 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 IL22Q9GZX6 179 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 KLHL25Q9H0H3 589 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 FAM114A2Q9NRY5 505 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 CUEDC1Q9NWM3 386 aaPredicted RBP8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 BFARQ9NZS9 450 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 FKBPLQ9UIM3 349 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 NTNG1Q9Y2I2 539 aa8.18□□□□□ -1.1
PCOLCE-209ENST00000490909 POLQO75417 2590 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 CPAMD8Q8IZJ3 1885 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 F8P00451 2351 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 HEATR9A2RTY3 570 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 MGAT4DA6NG13 374 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 WIPF3A6NGB9 483 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 A6NL46 340 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 C2orf81A6NN90 581 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 AGAP14A8MT82 685 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 CCL22O00626 93 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 EIF3HO15372 352 aaKnown RBP eCLIP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 KCNJ13O60928 360 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 KLF7O75840 302 aaPredicted RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 SEC31AO94979 1220 aaKnown RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 SLU7O95391 586 aaKnown RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 AGTP01019 485 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 TUBBP07437 444 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 SLC35G4P0C7Q5 338 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 MSL3P1P0C860 447 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 PRSS56P0CW18 603 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 ADRA1DP25100 572 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 IVDP26440 423 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 HADHAP40939 763 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 GABRA4P48169 554 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 PRLHRP49683 370 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 ARL4DP49703 201 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 ZNF140P52738 457 aaPredicted RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 MSLNQ13421 630 aaPredicted RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 ITGA9Q13797 1035 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 NR6A1Q15406 480 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 TAF1AQ15573 450 aaPredicted RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 DEFB110Q30KQ9 67 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 DNAJC21Q5F1R6 531 aaKnown RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 RNASEH2BQ5TBB1 312 aaKnown RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 DENND5AQ6IQ26 1287 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 HIBCHQ6NVY1 386 aaPredicted RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 KLHL35Q6PF15 583 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 CDHR3Q6ZTQ4 885 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 MAMDC2Q7Z304 686 aaPredicted RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 TRIM73Q86UV7 250 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 BPHLQ86WA6 291 aaPredicted RBP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 CARFQ8N187 725 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 OR13C4Q8NGS5 318 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 OR8K5Q8NH50 307 aa8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.17□□□□□ -1.1
PCOLCE-209ENST00000490909 PNPLA2Q96AD5 504 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms