RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 IMP3Q9NV31 184 aaKnown RBP6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 NFKBIL1Q9UBC1 381 aaPredicted RBP6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 DNPEPQ9ULA0 475 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 PSMD13Q9UNM6 376 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 ASB1Q9Y576 335 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 FHOD1Q9Y613 1164 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 CFAP20Q9Y6A4 193 aaKnown RBP6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 ZNF407Q9C0G0 2248 aa6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 PHF3Q92576 2039 aaKnown RBP6.82□□□□□ -1.32
PDLIM1-203ENST00000490391 ABCA1O95477 2261 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 GSAPA4D1B5 854 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 ASPDHA6ND91 283 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 KRTAP9-7A8MTY7 169 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 BTN3A3O00478 584 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 ZSCAN9O15535 394 aaPredicted RBP6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 KLK8O60259 260 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 MAFKO60675 156 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 CDK14O94921 469 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 ERCC2P18074 760 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 VCLP18206 1134 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 NFKB1P19838 968 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 HLA-DPA1P20036 260 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 GPD1P21695 349 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 PON1P27169 355 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 CHRNB4P30926 498 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 DCDC1P59894 354 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 PPP2R2BQ00005 443 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 HSF1Q00613 529 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 PNOCQ13519 176 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 ZIC1Q15915 447 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 DEFB110Q30KQ9 67 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 PDPK2PQ6A1A2 396 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 ALG1LQ6GMV1 187 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 HIBCHQ6NVY1 386 aaPredicted RBP6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 ARMC6Q6NXE6 501 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 DPY19L2P1Q6NXN4 242 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 SCYL2Q6P3W7 929 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 RFX8Q6ZV50 586 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 OVCH1Q7RTY7 1134 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 NOP9Q86U38 636 aaKnown RBP6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 NDUFAF2Q8N183 169 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 TRAM1L1Q8N609 369 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 CPSF7Q8N684 471 aaKnown RBP6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 SIRT6Q8N6T7 355 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 MSANTD4Q8NCY6 345 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 GPR26Q8NDV2 337 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 CPLX3Q8WVH0 158 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 ASB5Q8WWX0 329 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 FOXD4L4Q8WXT5 416 aaPredicted RBP6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 ZSCAN5AQ9BUG6 496 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 NUP85Q9BW27 656 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 SPATA16Q9BXB7 569 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 TDRD1Q9BXT4 1180 aaKnown RBP6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 PDCL3Q9H2J4 239 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 GOLPH3LQ9H4A5 285 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 KIR3DX1Q9H7L2 352 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 ZFYVE1Q9HBF4 777 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 ZNF160Q9HCG1 818 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 KCNJ16Q9NPI9 418 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 SAMSN1Q9NSI8 373 aaKnown RBP6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 STMN3Q9NZ72 180 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 PKD2L2Q9NZM6 624 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 CTSFQ9UBX1 484 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 RNF6Q9Y252 685 aa6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 MRPS2Q9Y399 296 aaKnown RBP6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 KMT2CQ8NEZ4 4911 aaKnown RBP6.81□□□□□ -1.32
PDLIM1-203ENST00000490391 A0A1W2PQ72 361 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 OR5H15A6NDH6 313 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 FAM227AF5H4B4 570 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 MATN2O00339 956 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 EEF2KO00418 725 aaKnown RBP6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 BTN3A1O00481 513 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 ASNA1O43681 348 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 KCNJ13O60928 360 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 CRLF1O75462 422 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 SIX3O95343 332 aaPredicted RBP6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 TSPAN12O95859 305 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 RAF1P04049 648 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 CYP1A1P04798 512 aaPredicted RBP6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 CELA2AP08217 269 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 MMEP08473 750 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 KRT3P12035 628 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 ABOP16442 354 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 FDXRP22570 491 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 MMP13P45452 471 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 ZNF143P52747 638 aaPredicted RBP6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 GSCP56915 257 aaPredicted RBP6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 BPIFB4P59827 614 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 PRKAA1Q13131 559 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 OLIG2Q13516 323 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 NFE2L1Q14494 772 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 RBBP7Q16576 425 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 SLC5A12Q1EHB4 618 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 ANKRD20A8PQ5CZ79 823 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 ALS2CLQ60I27 953 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 ATG9BQ674R7 924 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 ATL3Q6DD88 541 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 NAPRTQ6XQN6 538 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms