RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 OR4E2Q8NGC2 313 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 OR9A1PQ8NGU1 263 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 CFAP61Q8NHU2 1237 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 DENND1AQ8TEH3 1009 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 SKA2Q8WVK7 121 aaPredicted RBP16.91■□□□□ 0.3
ERCC3-207ENST00000490062 NCSTNQ92542 709 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 DLG3Q92796 817 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 CCDC77Q9BR77 488 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 PITPNM3Q9BZ71 974 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 CAB39LQ9H9S4 337 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 PARVBQ9HBI1 364 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 HRASLS2Q9NWW9 162 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 POMT2Q9UKY4 750 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 RUVBL2Q9Y230 463 aaKnown RBP16.91■□□□□ 0.3
ERCC3-207ENST00000490062 IKBKGQ9Y6K9 419 aa16.91■□□□□ 0.3
ERCC3-207ENST00000490062 OR6C74A6NCV1 312 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 BTN3A1O00481 513 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 PRICKLE3O43900 615 aaPredicted RBP16.9■□□□□ 0.3
ERCC3-207ENST00000490062 ALDOAP04075 364 aaKnown RBP16.9■□□□□ 0.3
ERCC3-207ENST00000490062 SLC35E2BP0CK96 405 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 CYP2A7P20853 494 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 HSD17B3P37058 310 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 BDKRB1P46663 353 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 SERPINB8P50452 374 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 PGGT1BP53609 377 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 AP1S2P56377 157 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 ATP6V0D1P61421 351 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 ZNF460Q14592 562 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 KIR2DS3Q14952 304 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 MROH9Q5TGP6 573 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 ANKS6Q68DC2 871 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 SBSNQ6UWP8 590 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 UBE2R2Q712K3 238 aaPredicted RBP16.9■□□□□ 0.3
ERCC3-207ENST00000490062 KMT5CQ86Y97 462 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 SPNS2Q8IVW8 549 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 RAB42Q8N4Z0 105 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 LINC01555Q8NAE3 123 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 FLVCR1-AS1Q8TAF5 88 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 ANKRD49Q8WVL7 239 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 KLHL6Q8WZ60 621 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 MTBPQ96DY7 904 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 SCNM1Q9BWG6 230 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 NRSN2Q9GZP1 204 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 SEMA6CQ9H3T2 930 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 EURLQ9NYK6 297 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 TMEM9Q9P0T7 183 aa16.9■□□□□ 0.3
ERCC3-207ENST00000490062 TDRKHQ9Y2W6 561 aaKnown RBP16.9■□□□□ 0.3
ERCC3-207ENST00000490062 CCDC187A0A096LP49 1063 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 TLCD2A6NGC4 264 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 ZNF839A8K0R7 811 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 C2orf74A8MZ97 194 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 POC1B-GALNT4F8VUJ3 575 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 PHGDHO43175 533 aaKnown RBP16.89■□□□□ 0.29
ERCC3-207ENST00000490062 KRT37O76014 449 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 TOP3BO95985 862 aaKnown RBP16.89■□□□□ 0.29
ERCC3-207ENST00000490062 CHRM5P08912 532 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-207ENST00000490062 SNRPAP09012 282 aaKnown RBP16.89■□□□□ 0.29
ERCC3-207ENST00000490062 SAT1P21673 171 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 MLLT3P42568 568 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-207ENST00000490062 GFERP55789 205 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 CLDN6P56747 220 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 CDKL1Q00532 357 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 FOXK2Q01167 660 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 PRKAA1Q13131 559 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 NAA30Q147X3 362 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-207ENST00000490062 RTP5Q14D33 572 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 PPP1R3AQ16821 1122 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 CCSMST1Q4G0I0 132 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 LGSNQ5TDP6 509 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 ADAMTSL2Q86TH1 951 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 UHMK1Q8TAS1 419 aaKnown RBP16.89■□□□□ 0.29
ERCC3-207ENST00000490062 MCOLN3Q8TDD5 553 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 UBLCP1Q8WVY7 318 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-207ENST00000490062 JPH3Q8WXH2 748 aaPredicted RBP16.89■□□□□ 0.29
ERCC3-207ENST00000490062 SLC22A18Q96BI1 424 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 CCDC74BQ96LY2 380 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 STRADBQ9C0K7 418 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 CHRNA10Q9GZZ6 450 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 ZNF768Q9H5H4 540 aaKnown RBP16.89■□□□□ 0.29
ERCC3-207ENST00000490062 SYNDIG1Q9H7V2 258 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 SNX15Q9NRS6 342 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 C1GALT1Q9NS00 363 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 LNPEPQ9UIQ6 1025 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 ADAMTS6Q9UKP5 1117 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 KLK13Q9UKR3 277 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 PDE10AQ9Y233 779 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 PCDHGA8Q9Y5G5 932 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 NCOR2Q9Y618 2525 aa16.89■□□□□ 0.29
ERCC3-207ENST00000490062 A0A087X1B8 175 aa16.88■□□□□ 0.29
ERCC3-207ENST00000490062 MED19A0JLT2 244 aaPredicted RBP16.88■□□□□ 0.29
ERCC3-207ENST00000490062 PIPSLA2A3N6 862 aa16.88■□□□□ 0.29
ERCC3-207ENST00000490062 C2P06681 752 aa16.88■□□□□ 0.29
ERCC3-207ENST00000490062 CD1DP15813 335 aa16.88■□□□□ 0.29
ERCC3-207ENST00000490062 MAP4P27816 1152 aaKnown RBP16.88■□□□□ 0.29
ERCC3-207ENST00000490062 PRDX3P30048 256 aaKnown RBP16.88■□□□□ 0.29
ERCC3-207ENST00000490062 KPNA2P52292 529 aaKnown RBP16.88■□□□□ 0.29
ERCC3-207ENST00000490062 BMPR2Q13873 1038 aa16.88■□□□□ 0.29
ERCC3-207ENST00000490062 SLC5A12Q1EHB4 618 aa16.88■□□□□ 0.29
ERCC3-207ENST00000490062 CDKL4Q5MAI5 379 aa16.88■□□□□ 0.29
ERCC3-207ENST00000490062 ARMC6Q6NXE6 501 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms