RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PCED1BQ96HM7 432 aa8.69□□□□□ -1.02
LSAMP-205ENST00000490035 TTYH1Q9H313 450 aaPredicted RBP8.69□□□□□ -1.02
LSAMP-205ENST00000490035 MRPS30Q9NP92 439 aaKnown RBP8.69□□□□□ -1.02
LSAMP-205ENST00000490035 B3GAT2Q9NPZ5 323 aa8.69□□□□□ -1.02
LSAMP-205ENST00000490035 FAM120CQ9NX05 1096 aaKnown RBP8.69□□□□□ -1.02
LSAMP-205ENST00000490035 MED1Q15648 1581 aaPredicted RBP8.69□□□□□ -1.02
LSAMP-205ENST00000490035 FABP12A6NFH5 140 aa8.69□□□□□ -1.02
LSAMP-205ENST00000490035 TMEM150CB9EJG8 249 aa8.69□□□□□ -1.02
LSAMP-205ENST00000490035 SCAMP3O14828 347 aaKnown RBP8.69□□□□□ -1.02
LSAMP-205ENST00000490035 RFC2P35250 354 aa8.69□□□□□ -1.02
LSAMP-205ENST00000490035 CDH13P55290 713 aa8.69□□□□□ -1.02
LSAMP-205ENST00000490035 CBR4Q8N4T8 237 aa8.69□□□□□ -1.02
LSAMP-205ENST00000490035 FITM2Q8N6M3 262 aa8.69□□□□□ -1.02
LSAMP-205ENST00000490035 OR4C15Q8NGM1 316 aa8.69□□□□□ -1.02
LSAMP-205ENST00000490035 DUSP26Q9BV47 211 aa8.69□□□□□ -1.02
LSAMP-205ENST00000490035 OXSMQ9NWU1 459 aa8.69□□□□□ -1.02
LSAMP-205ENST00000490035 POMPQ9Y244 141 aa8.69□□□□□ -1.02
LSAMP-205ENST00000490035 HCN1O60741 890 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 CYP4B1P13584 511 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 DNAJB13P59910 316 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 GHRHRQ02643 423 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 ZC3HC1Q86WB0 502 aaKnown RBP8.68□□□□□ -1.02
LSAMP-205ENST00000490035 C1orf127Q8N9H9 656 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 SLC27A5Q9Y2P5 690 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 ARL5CA6NH57 179 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 E7ENX8 843 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 SEPT4O43236 478 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 SH3BGRLO75368 114 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 ULK3Q6PHR2 472 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 BAIAP2L2Q6UXY1 529 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 LRRN4CLQ8ND94 238 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 ZNF570Q96NI8 536 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 MAPKAP1Q9BPZ7 522 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 CHRAC1Q9NRG0 131 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 NLGN3Q9NZ94 848 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 VPS29Q9UBQ0 182 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 TISP43B9A030 160 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 SOCS5O75159 536 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 FESP07332 822 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 TM4SF1P30408 202 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 PTGIRP43119 386 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 LSM3P62310 102 aaKnown RBP8.68□□□□□ -1.02
LSAMP-205ENST00000490035 RAPSNQ13702 412 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 CHRDL2Q6WN34 429 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 OR2AJ1Q8NGZ0 328 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 TRPM4Q8TD43 1214 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 AOC1P19801 751 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 PLEKHN1Q494U1 663 aaPredicted RBP8.68□□□□□ -1.02
LSAMP-205ENST00000490035 ZBED5Q49AG3 693 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 SLC9A6Q92581 669 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 SLC38A3Q99624 504 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 MAFFQ9ULX9 164 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 MAP4K5Q9Y4K4 846 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 CAPN8A6NHC0 703 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 HRH2P25021 359 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 HSPA7P48741 367 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 C1QTNF8P60827 252 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 RELL1Q8IUW5 271 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 GLIS3Q8NEA6 775 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 OR2L5Q8NG80 312 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 JOSD2Q8TAC2 188 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 GAS2L1Q99501 681 aaPredicted RBP8.68□□□□□ -1.02
LSAMP-205ENST00000490035 ERVK-5Q9HDB9 667 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 NOCTQ9UK39 431 aaKnown RBP8.68□□□□□ -1.02
LSAMP-205ENST00000490035 MAGED1Q9Y5V3 778 aaPredicted RBP8.68□□□□□ -1.02
LSAMP-205ENST00000490035 CYP17A1P05093 508 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 UGT2B4P06133 528 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 CAP1Q01518 475 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 TCEAL1Q15170 157 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 FAM174BQ3ZCQ3 159 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 VARS2Q5ST30 1063 aaKnown RBP8.68□□□□□ -1.02
LSAMP-205ENST00000490035 KCTD8Q6ZWB6 473 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 SLC44A3Q8N4M1 653 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 OR5T3Q8NGG3 340 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 ZUFSPQ96AP4 578 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 LRRC58Q96CX6 371 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 PADI3Q9ULW8 664 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 SNX10Q9Y5X0 201 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 OR1F1O43749 312 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 MERTKQ12866 999 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 AHSA2Q719I0 299 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 FSTL5Q8N475 847 aaPredicted RBP8.68□□□□□ -1.02
LSAMP-205ENST00000490035 TRIM36Q9NQ86 728 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 MED31Q9Y3C7 131 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 EPHB6O15197 1021 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 HOXD8P13378 290 aaPredicted RBP8.68□□□□□ -1.02
LSAMP-205ENST00000490035 CCKBRP32239 447 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 ABATP80404 500 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 SLC30A6Q6NXT4 461 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 SUN3Q8TAQ9 357 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 TBATAQ96M53 351 aa8.68□□□□□ -1.02
LSAMP-205ENST00000490035 RHPN2P1A8MT19 583 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 CA12O43570 354 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 RNASEH2AO75792 299 aaKnown RBP8.67□□□□□ -1.02
LSAMP-205ENST00000490035 CD72P21854 359 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 GBE1Q04446 702 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 LRIF1Q5T3J3 769 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 MEDAGQ5VYS4 303 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 PARGQ86W56 976 aa8.67□□□□□ -1.02
LSAMP-205ENST00000490035 NAT8LQ8N9F0 302 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms