RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 CYP1A2P05177 515 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 PYGLP06737 847 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 CD48P09326 243 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 SKILP12757 684 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 CTPS1P17812 591 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 NFKBIAP25963 317 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 PBX1P40424 430 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 ACTR1BP42025 376 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 MMP13P45452 471 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 GPR1P46091 355 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 CLCNKAP51800 687 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 IL2P60568 153 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 ACTR1AP61163 376 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 RPL26P61254 145 aaKnown RBP6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 MC2RQ01718 297 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 OCRLQ01968 901 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 SRSF1Q07955 248 aaKnown RBP eCLIP6.28□□□□□ -1.42e-9■□□□□ 10.6
PRPF40A-210ENST00000489741 NIPAL4Q0D2K0 466 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 KLHL30Q0D2K2 578 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 GALNT2Q10471 571 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 PAFAH1B3Q15102 231 aaKnown RBP6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 ASIC2Q16515 512 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 SMTNL2Q2TAL5 461 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 MAP9Q49MG5 647 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 LRRC66Q68CR7 880 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 DENND2CQ68D51 928 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 RAET1GQ6H3X3 334 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 WDR74Q6RFH5 385 aaPredicted RBP6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 Q6ZSN1 163 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 USP45Q70EL2 814 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 BBS5Q8N3I7 341 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 ZNF808Q8N4W9 903 aaPredicted RBP6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 AOPEPQ8N6M6 819 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 ANKRD53Q8N9V6 530 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 OR2W6PQ8NHA6 318 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 EXD1Q8NHP7 514 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 SLC37A2Q8TED4 501 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 PDCD6IPQ8WUM4 868 aaKnown RBP6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 SYN2Q92777 582 aaPredicted RBP6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 ART4Q93070 314 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 ZNF653Q96CK0 615 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 AP2M1Q96CW1 435 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 EID2BQ96D98 161 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 SLC45A3Q96JT2 553 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 OR2M4Q96R27 311 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 ASPSCR1Q9BZE9 553 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 SARS2Q9NP81 518 aaKnown RBP6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 FBXO8Q9NRD0 319 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 SLC39A1Q9NY26 324 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 VPS18Q9P253 973 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 TBC1D29Q9UFV1 150 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 CD84Q9UIB8 345 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 RPL26L1Q9UNX3 145 aaKnown RBP6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 HEMK1Q9Y5R4 338 aaPredicted RBP6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 LRP4O75096 1905 aa6.28□□□□□ -1.4
PRPF40A-210ENST00000489741 SCN8AQ9UQD0 1980 aa6.27□□□□□ -1.4
PRPF40A-210ENST00000489741 NOTCH2Q04721 2471 aa6.27□□□□□ -1.4
PRPF40A-210ENST00000489741 RGSL1A5PLK6 1076 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 RAD1O60671 282 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 PPFIA2O75334 1257 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 CLDN7O95471 211 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 FSHBP01225 129 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 MMP2P08253 660 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 LIFP15018 202 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 CCNCP24863 283 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 CSTF2P33240 577 aaKnown RBP eCLIP6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 SERPINB6P35237 376 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 GARSP41250 739 aaKnown RBP6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 SPINT3P49223 89 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 SLC10A2Q12908 348 aaPredicted RBP6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 IQCB1Q15051 598 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 SEPT7Q16181 437 aaKnown RBP6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 ATP13A4Q4VNC1 1196 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 COLEC12Q5KU26 742 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 CCDC183Q5T5S1 534 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 DCAF12Q5T6F0 453 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 HENMT1Q5T8I9 393 aaKnown RBP6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 NCBP2-AS2Q69YL0 99 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 TIPARPQ7Z3E1 657 aaKnown RBP6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 ADGRE4PQ86SQ3 457 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 TRIM74Q86UV6 250 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 CACNA2D3Q8IZS8 1091 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 NDUFAF2Q8N183 169 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 ATPAF2Q8N5M1 289 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 ZNF564Q8TBZ8 553 aaPredicted RBP6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 NSMCE1Q8WV22 266 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 JPH3Q8WXH2 748 aaPredicted RBP6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 HSPH1Q92598 858 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 FAF2Q96CS3 445 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 RTP4Q96DX8 246 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 CATSPER2Q96P56 530 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 TEFMQ96QE5 360 aaKnown RBP6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 ZPBPQ9BS86 351 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 RIOK2Q9BVS4 552 aaKnown RBP6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 TDRD1Q9BXT4 1180 aaKnown RBP6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 TRIM4Q9C037 500 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 POLR1EQ9GZS1 481 aaKnown RBP6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 THAP2Q9H0W7 228 aa6.27□□□□□ -1.41
PRPF40A-210ENST00000489741 SUDS3Q9H7L9 328 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms