RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 CCDC110Q8TBZ0 833 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 KRT35Q92764 455 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 TBL1YQ9BQ87 522 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 FERMT1Q9BQL6 677 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 NDC1Q9BTX1 674 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 CHRNA10Q9GZZ6 450 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 SLC6A20Q9NP91 592 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 SLC22A11Q9NSA0 550 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 SMARCAL1Q9NZC9 954 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 FBXL4Q9UKA2 621 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 PLAGL1Q9UM63 463 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 NOVA2Q9UNW9 492 aaKnown RBP16.34■□□□□ 0.21
TOP3B-217ENST00000489581 OSGIN2Q9Y236 505 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 PRSS21Q9Y6M0 314 aa16.34■□□□□ 0.21
TOP3B-217ENST00000489581 MACROD2A1Z1Q3 448 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 ISM1B1AKI9 464 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 KCNN4O15554 427 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 MFAP3LO75121 409 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 ACADLP28330 430 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 OTUD4Q01804 1114 aaKnown RBP16.33■□□□□ 0.2
TOP3B-217ENST00000489581 DBN1Q16643 649 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 PRAMEF13Q5VWM6 474 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 PIANPQ8IYJ0 282 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 TBC1D21Q8IYX1 336 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 SLC34A3Q8N130 599 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 DNAJB14Q8TBM8 379 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 ACTL9Q8TC94 416 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 GRHL3Q8TE85 626 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 PPP4R1Q8TF05 950 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 FAM118BQ9BPY3 351 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 C19orf43Q9BQ61 176 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 ARNT2Q9HBZ2 717 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 OR6C2Q9NZP2 312 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 PLCL2Q9UPR0 1127 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 KLHL20Q9Y2M5 609 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 PCNX1Q96RV3 2341 aa16.33■□□□□ 0.2
TOP3B-217ENST00000489581 ARHGAP10A1A4S6 786 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 LIN7AO14910 233 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-217ENST00000489581 GSTM1P09488 218 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 TPM1P09493 284 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 PRF1P14222 555 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 TPH1P17752 444 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 MMP11P24347 488 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 PEBP1P30086 187 aaKnown RBP16.32■□□□□ 0.2
TOP3B-217ENST00000489581 GSTM4Q03013 218 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 DARS2Q6PI48 645 aaKnown RBP16.32■□□□□ 0.2
TOP3B-217ENST00000489581 TTLL10Q6ZVT0 673 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 PARP9Q8IXQ6 854 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 ELMO1Q92556 727 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 MARVELD3Q96A59 401 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 CDKN2AIPNLQ96HQ2 116 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 CNDP1Q96KN2 507 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 EURLQ9NYK6 297 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 POLG2Q9UHN1 485 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 CDC23Q9UJX2 597 aa16.32■□□□□ 0.2
TOP3B-217ENST00000489581 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.32■□□□□ 0.2
TOP3B-217ENST00000489581 PKDREJQ9NTG1 2253 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 H7C0S8 307 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 E2F3O00716 465 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 SOCS6O14544 535 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 ZG16O60844 167 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 STK10O94804 968 aaKnown RBP16.31■□□□□ 0.2
TOP3B-217ENST00000489581 AP2A2O94973 939 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 RBP3P10745 1247 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 ITGAXP20702 1163 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 CTNNA2P26232 953 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 HADHBP55084 474 aaKnown RBP16.31■□□□□ 0.2
TOP3B-217ENST00000489581 PER3P56645 1201 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 EIF3EP60228 445 aaKnown RBP16.31■□□□□ 0.2
TOP3B-217ENST00000489581 CACNG1Q06432 222 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 CDC16Q13042 620 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 SLC5A12Q1EHB4 618 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 AGAP7PQ5VUJ5 663 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 CDKL3Q8IVW4 592 aaPredicted RBP16.31■□□□□ 0.2
TOP3B-217ENST00000489581 OR5K2Q8NHB8 316 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 FAR1Q8WVX9 515 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 SPATA13Q96N96 652 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 AGAP4Q96P64 663 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 NLE1Q9NVX2 485 aaPredicted RBP16.31■□□□□ 0.2
TOP3B-217ENST00000489581 TFR2Q9UP52 801 aa16.31■□□□□ 0.2
TOP3B-217ENST00000489581 POLQO75417 2590 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 CCDC78A2IDD5 438 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 BHMG1C9JSJ3 638 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-217ENST00000489581 HNRNPRO43390 633 aaKnown RBP16.3■□□□□ 0.2
TOP3B-217ENST00000489581 CBFA2T2O43439 604 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 MAGP20916 626 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 MAGEA1P43355 309 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 TSFMP43897 325 aaKnown RBP16.3■□□□□ 0.2
TOP3B-217ENST00000489581 ZNF169Q14929 603 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-217ENST00000489581 ZRSR2Q15696 482 aaKnown RBP16.3■□□□□ 0.2
TOP3B-217ENST00000489581 IRAK1BP1Q5VVH5 260 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 SP5Q6BEB4 398 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-217ENST00000489581 IGFL2Q6UWQ7 119 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 SHISA6Q6ZSJ9 500 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 OVCH1Q7RTY7 1134 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 TMTC1Q8IUR5 882 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 MCATQ8IVS2 390 aaKnown RBP16.3■□□□□ 0.2
TOP3B-217ENST00000489581 VSTM4Q8IW00 320 aa16.3■□□□□ 0.2
TOP3B-217ENST00000489581 C2orf73Q8N5S3 287 aaPredicted RBP16.3■□□□□ 0.2
TOP3B-217ENST00000489581 LMNTD1Q8N9Z9 388 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms