RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 RAB28P51157 221 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 KCNC4Q03721 635 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 GRB7Q14451 532 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 TMED2Q15363 201 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 TRIP13Q15645 432 aaPredicted RBP12.12□□□□□ -0.47
SRRM1-216ENST00000489130 KYNUQ16719 465 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 KCTD19Q17RG1 926 aaPredicted RBP12.12□□□□□ -0.47
SRRM1-216ENST00000489130 SLC5A12Q1EHB4 618 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 ZNF385CQ66K41 422 aaPredicted RBP12.12□□□□□ -0.47
SRRM1-216ENST00000489130 PTRHD1Q6GMV3 140 aaKnown RBP12.12□□□□□ -0.47
SRRM1-216ENST00000489130 LCN10Q6JVE6 187 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 TCTN3Q6NUS6 607 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 DCUN1D3Q8IWE4 304 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 SYTL1Q8IYJ3 562 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 KRT222Q8N1A0 295 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 LINC01555Q8NAE3 123 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 PANX3Q96QZ0 392 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 DPH2Q9BQC3 489 aaPredicted RBP12.12□□□□□ -0.47
SRRM1-216ENST00000489130 CLMPQ9H6B4 373 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 GNPTGQ9UJJ9 305 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 ANAPC2Q9UJX6 822 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 TTC7AQ9ULT0 858 aaPredicted RBP12.12□□□□□ -0.47
SRRM1-216ENST00000489130 SOX13Q9UN79 622 aa12.12□□□□□ -0.47
SRRM1-216ENST00000489130 KPNA5O15131 536 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 ZNF749O43361 778 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 HCRTR1O43613 425 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 NDUFS3O75489 264 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 VAPBO95292 243 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 HBQ1P09105 142 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 CD9P21926 228 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 CASRP41180 1078 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 TLE1Q04724 770 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 GPS1Q13098 491 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 CYP1B1Q16678 543 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 TYSND1Q2T9J0 566 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 DEFB110Q30KQ9 67 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 CTSL3PQ5NE16 218 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 RNF187Q5TA31 235 aaPredicted RBP12.11□□□□□ -0.47
SRRM1-216ENST00000489130 KIAA0930Q6ICG6 404 aaPredicted RBP12.11□□□□□ -0.47
SRRM1-216ENST00000489130 MRNIPQ6NTE8 343 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 TTC27Q6P3X3 843 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 CES3Q6UWW8 571 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 GPR135Q8IZ08 494 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 ENDOVQ8N8Q3 282 aaKnown RBP12.11□□□□□ -0.47
SRRM1-216ENST00000489130 ADAMTS17Q8TE56 1095 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 PBKQ96KB5 322 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 SLC7A5P2Q9GIP4 190 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 EPN3Q9H201 632 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 TLK1Q9UKI8 766 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 TCFL5Q9UL49 500 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 SNX7Q9UNH6 387 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 TP53TG5Q9Y2B4 290 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 AP1M2Q9Y6Q5 423 aa12.11□□□□□ -0.47
SRRM1-216ENST00000489130 ISM1B1AKI9 464 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 GOLGA8KD6RF30 607 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 GOLGA8TH3BQL2 631 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 K7EM74 188 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 DNAJB5O75953 348 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 OR2B3O76000 313 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 OGNP20774 298 aaKnown RBP12.1□□□□□ -0.47
SRRM1-216ENST00000489130 VPS41P49754 854 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 ADARP55265 1226 aaKnown RBP12.1□□□□□ -0.47
SRRM1-216ENST00000489130 SARNPP82979 210 aaKnown RBP12.1□□□□□ -0.47
SRRM1-216ENST00000489130 NCF4Q15080 339 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 PTCHD3Q3KNS1 767 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 ANKRD22Q5VYY1 191 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 RHBDD2Q6NTF9 364 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 OTOAQ7RTW8 1153 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 SDCCAG8Q86SQ7 713 aaPredicted RBP12.1□□□□□ -0.47
SRRM1-216ENST00000489130 CAND1Q86VP6 1230 aaKnown RBP12.1□□□□□ -0.47
SRRM1-216ENST00000489130 DNAJC22Q8N4W6 341 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 OR2L8Q8NGY9 312 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 CFAP61Q8NHU2 1237 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 LPGAT1Q92604 370 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 N4BP2L2Q92802 583 aaPredicted RBP12.1□□□□□ -0.47
SRRM1-216ENST00000489130 MAGOHBQ96A72 148 aaKnown RBP12.1□□□□□ -0.47
SRRM1-216ENST00000489130 SLC22A18Q96BI1 424 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 MS4A14Q96JA4 679 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 BIRC8Q96P09 236 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 TRIM55Q9BYV6 548 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 NEU2Q9Y3R4 380 aa12.1□□□□□ -0.47
SRRM1-216ENST00000489130 C9J4A7 227 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 H3BMM5 538 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 RASGRF2O14827 1237 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 PFDN6O15212 129 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 ZSCAN9O15535 394 aaPredicted RBP12.09□□□□□ -0.47
SRRM1-216ENST00000489130 AVILO75366 819 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 TMEM63AO94886 807 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 C1orf105O95561 183 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 S1PR4O95977 384 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 KRT14P02533 472 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 MLNP12872 115 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 PAMP19021 973 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 NR1D1P20393 614 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 MAGP20916 626 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 AGXTP21549 392 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 EIF3BP55884 814 aaKnown RBP12.09□□□□□ -0.47
SRRM1-216ENST00000489130 KLRB1Q12918 225 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 GBX1Q14549 363 aa12.09□□□□□ -0.47
SRRM1-216ENST00000489130 FAM69BQ5VUD6 431 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms