RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RNF187Q5TA31 235 aaPredicted RBP24.14■■□□□ 1.45
HMGN1-217ENST00000489072 NEPROQ6NW34 567 aa24.14■■□□□ 1.45
HMGN1-217ENST00000489072 CENPUQ71F23 418 aa24.14■■□□□ 1.45
HMGN1-217ENST00000489072 ZNF605Q86T29 641 aa24.14■■□□□ 1.45
HMGN1-217ENST00000489072 DCUN1D3Q8IWE4 304 aa24.14■■□□□ 1.45
HMGN1-217ENST00000489072 IL17FQ96PD4 163 aa24.14■■□□□ 1.45
HMGN1-217ENST00000489072 STARD5Q9NSY2 213 aa24.14■■□□□ 1.45
HMGN1-217ENST00000489072 GEMIN8Q9NWZ8 242 aaKnown RBP24.14■■□□□ 1.45
HMGN1-217ENST00000489072 CRYL1Q9Y2S2 319 aa24.14■■□□□ 1.45
HMGN1-217ENST00000489072 NFS1Q9Y697 457 aa24.14■■□□□ 1.45
HMGN1-217ENST00000489072 A0A0J9YY10 115 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 ZCWPW2A0A1B0GU75 182 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 B8ZZF3 427 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 C21orf140B9A014 251 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 HCRTR1O43613 425 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 KDM1AO60341 852 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 F7P08709 466 aaPredicted RBP24.13■■□□□ 1.45
HMGN1-217ENST00000489072 PLA2G2AP14555 144 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 PAMP19021 973 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 CCR10P46092 362 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 NFATC3Q12968 1075 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 ERV3-1Q14264 604 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 PLEKHS1Q5SXH7 462 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 LCN10Q6JVE6 187 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 ZNF517Q6ZMY9 492 aaPredicted RBP24.13■■□□□ 1.45
HMGN1-217ENST00000489072 OTOAQ7RTW8 1153 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 TMEM135Q86UB9 458 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 HOOK3Q86VS8 718 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 CILP2Q8IUL8 1156 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 SIGLEC10Q96LC7 697 aa24.13■■□□□ 1.45
HMGN1-217ENST00000489072 DDX47Q9H0S4 455 aaKnown RBP24.13■■□□□ 1.45
HMGN1-217ENST00000489072 RUVBL2Q9Y230 463 aaKnown RBP24.13■■□□□ 1.45
HMGN1-217ENST00000489072 MAGEB16A2A368 324 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 ISM1B1AKI9 464 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 KPNA5O15131 536 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 MAP3K7O43318 606 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 CREG1O75629 220 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 RPN2P04844 631 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 GABRA4P48169 554 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 ADARP55265 1226 aaKnown RBP24.12■■□□□ 1.45
HMGN1-217ENST00000489072 KIR2DS3Q14952 304 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 SLC5A12Q1EHB4 618 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 RNASEH2BQ5TBB1 312 aaKnown RBP24.12■■□□□ 1.45
HMGN1-217ENST00000489072 FAM20CQ8IXL6 584 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 PPIL6Q8IXY8 311 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 C2orf73Q8N5S3 287 aaPredicted RBP24.12■■□□□ 1.45
HMGN1-217ENST00000489072 MR1Q95460 341 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 FAM136AQ96C01 138 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 TCTN2Q96GX1 697 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 LRFN5Q96NI6 719 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 ADNPQ9H2P0 1102 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 ACTL8Q9H568 366 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 GALPQ9UBC7 116 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 PYCARDQ9ULZ3 195 aa24.12■■□□□ 1.45
HMGN1-217ENST00000489072 ESR1P03372 595 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 TCP1P17987 556 aaKnown RBP24.11■■□□□ 1.45
HMGN1-217ENST00000489072 CYP2A7P20853 494 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 RORAP35398 523 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 BDKRB1P46663 353 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 ITGA1P56199 1179 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 RPS18P62269 152 aaKnown RBP24.11■■□□□ 1.45
HMGN1-217ENST00000489072 KCNAB2Q13303 367 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 GBX1Q14549 363 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 PPP1R7Q15435 360 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 DEFB110Q30KQ9 67 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 CCSMST1Q4G0I0 132 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 ZNF470Q6ECI4 717 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 DSELQ8IZU8 1212 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 CHRNA10Q9GZZ6 450 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 CHST8Q9H2A9 424 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 SERTAD3Q9UJW9 196 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 TENM4Q6N022 2769 aa24.11■■□□□ 1.45
HMGN1-217ENST00000489072 KRT87PA6NCN2 255 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 H3BMH7 237 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 MEN1O00255 615 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 RASGRF2O14827 1237 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 PFDN6O15212 129 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 C1orf105O95561 183 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 S1PR4O95977 384 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 CTSBP07858 339 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 SFTPCP11686 197 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 CD9P21926 228 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 TAX1BP1Q86VP1 789 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 DENND6AQ8IWF6 608 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 OR2L8Q8NGY9 312 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 GSDMBQ8TAX9 411 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 SKA2Q8WVK7 121 aaPredicted RBP24.1■■□□□ 1.45
HMGN1-217ENST00000489072 APOBEC4Q8WW27 367 aaKnown RBP24.1■■□□□ 1.45
HMGN1-217ENST00000489072 ANP32BQ92688 251 aaKnown RBP24.1■■□□□ 1.45
HMGN1-217ENST00000489072 CLIP3Q96DZ5 547 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 ACTR5Q9H9F9 607 aaPredicted RBP24.1■■□□□ 1.45
HMGN1-217ENST00000489072 PCMTD2Q9NV79 361 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 TSR3Q9UJK0 312 aaKnown RBP24.1■■□□□ 1.45
HMGN1-217ENST00000489072 KLHL20Q9Y2M5 609 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 MAD1L1Q9Y6D9 718 aa24.1■■□□□ 1.45
HMGN1-217ENST00000489072 CDC14CA4D256 554 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 H3BMM5 538 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 USP1O94782 785 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 PKMP14618 531 aaKnown RBP24.09■■□□□ 1.45
HMGN1-217ENST00000489072 PTPN4P29074 926 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms