RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 TRPV4Q9HBA0 871 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 GID8Q9NWU2 228 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 CD274Q9NZQ7 290 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 EBF1Q9UH73 591 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 SLC7A8Q9UHI5 535 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 CRLS1Q9UJA2 301 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 INTS6Q9UL03 887 aaKnown RBP6.51□□□□□ -1.37
PDCD4-209ENST00000489049 SARDHQ9UL12 918 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 ERVW-1Q9UQF0 538 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 AP3M1Q9Y2T2 418 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 C15orf41Q9Y2V0 281 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 MED16Q9Y2X0 877 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 NDUFAF1Q9Y375 327 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 MRPS23Q9Y3D9 190 aaKnown RBP6.51□□□□□ -1.37
PDCD4-209ENST00000489049 OARD1Q9Y530 152 aa6.51□□□□□ -1.37
PDCD4-209ENST00000489049 COPG1Q9Y678 874 aaKnown RBP6.51□□□□□ -1.37
PDCD4-209ENST00000489049 C15orf38-AP3S2A0A0A6YYH1 394 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 SHISA3A0PJX4 238 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 KLHL33A6NCF5 533 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 HIDE1A8MVS5 230 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 H0Y858 1186 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 K7ERQ8 282 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 UBXN8O00124 270 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 CCL22O00626 93 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 NPC1O15118 1278 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 BUD23O43709 281 aaKnown RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 PEX1O43933 1283 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ENTPD5O75356 428 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 KATNA1O75449 491 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 GJB3O75712 270 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 FTH1P02794 183 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 HNRNPLP14866 589 aaKnown RBP eCLIP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ACADSP16219 412 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 BPIP17213 487 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ITGAXP20702 1163 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 KCNA5P22460 613 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 XPAP23025 273 aaPredicted RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ME2P23368 584 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 EEF1DP29692 281 aaKnown RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 HLA-FP30511 346 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 GGT5P36269 586 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 KCNC1P48547 511 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 SPINT3P49223 89 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 CCNHP51946 323 aaPredicted RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 AP1S2P56377 157 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 TBL3Q12788 808 aaKnown RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 FASTKQ14296 549 aaKnown RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 RPS6KA2Q15349 733 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 TGFBIQ15582 683 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 TSNQ15631 228 aaKnown RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 SMAD1Q15797 465 aaKnown RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 FUT11Q495W5 492 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ACCSLQ4AC99 568 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 KHDC1Q4VXA5 237 aaKnown RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 SETMARQ53H47 684 aaPredicted RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ZNF805Q5CZA5 627 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ACSBG2Q5FVE4 666 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 CTSL3PQ5NE16 218 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 SAMD4BQ5PRF9 694 aaKnown RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 LDLRAP1Q5SW96 308 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 C10orf62Q5T681 223 aaPredicted RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 VWA5B1Q5TIE3 1220 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ERAP2Q6P179 960 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 CCDC81Q6ZN84 652 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 DPPA4Q7L190 304 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ARPINQ7Z6K5 226 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 DSG4Q86SJ6 1040 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ADIPOR2Q86V24 386 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 PIM3Q86V86 326 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 SNX32Q86XE0 403 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 TMEM25Q86YD3 366 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 PHACTR4Q8IZ21 702 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 DEFB107AQ8IZN7 70 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 DSELQ8IZU8 1212 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 SPATA6LQ8N4H0 392 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 TRAM1L1Q8N609 369 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 TMIEQ8NEW7 156 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 WFDC5Q8TCV5 224 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 EEF1AKMT1Q8WVE0 214 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 OSCP1Q8WVF1 389 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 UCMAQ8WVF2 138 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ATL1Q8WXF7 558 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 METTL2AQ96IZ6 378 aaKnown RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 VPS35Q96QK1 796 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 HGH1Q9BTY7 390 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 TM6SF2Q9BZW4 377 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 TRIM15Q9C019 465 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 CIPCQ9C0C6 399 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 FAM83DQ9H4H8 585 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ZNF552Q9H707 407 aaPredicted RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 SFXN1Q9H9B4 322 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 WDR41Q9HAD4 459 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 MID1IP1Q9NPA3 183 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 SDR39U1Q9NRG7 319 aaPredicted RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 ZIM2Q9NZV7 527 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 C6orf203Q9P0P8 240 aaPredicted RBP6.5□□□□□ -1.37
PDCD4-209ENST00000489049 SUN2Q9UH99 717 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 POLG2Q9UHN1 485 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 GPR160Q9UJ42 338 aa6.5□□□□□ -1.37
PDCD4-209ENST00000489049 CDH22Q9UJ99 828 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms