RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 FGF4P08620 206 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 POLR2MP0CAP2 368 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 APEHP13798 732 aaKnown RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 CD22P20273 847 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 JAK1P23458 1154 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 AKT2P31751 481 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 SSR1P43307 286 aaKnown RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 MAGEB1P43366 347 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 RGS7P49802 495 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 CNN1P51911 297 aaKnown RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 HNRNPFP52597 415 aaKnown RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 VCPP55072 806 aaKnown RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 TPTEP56180 551 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 CDK3Q00526 305 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 FOLH1Q04609 750 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 ITIH3Q06033 890 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 NAE1Q13564 534 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 PKP1Q13835 747 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 KRT33BQ14525 404 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 NR1D2Q14995 579 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 MAPK11Q15759 364 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 DPYSL2Q16555 572 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 C2orf68Q2NKX9 166 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 MCMDC2Q4G0Z9 681 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM41BQ5BJD5 291 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 ARL13AQ5H913 290 aaPredicted RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 C1orf185Q5T7R7 199 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 SULT1C3Q6IMI6 304 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 CYB5D1Q6P9G0 228 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 ENPP7Q6UWV6 458 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 RTN4RL2Q86UN3 420 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 NUDT13Q86X67 352 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 FOXP4Q8IVH2 680 aaPredicted RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 BBS5Q8N3I7 341 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 FADS6Q8N9I5 356 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 C8orf58Q8NAV2 365 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 FAM71CQ8NEG0 241 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 MCPH1Q8NEM0 835 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 GJC3Q8NFK1 279 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 TRIM58Q8NG06 486 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 XAGE5Q8WWM1 108 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 LINC00476Q8WZB0 136 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 LPIN2Q92539 896 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 ESAMQ96AP7 390 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 SPDL1Q96EA4 605 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 TPD52L3Q96J77 140 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 HARBI1Q96MB7 349 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 SLC22A12Q96S37 553 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 SMC6Q96SB8 1091 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 SPAG8Q99932 426 aaPredicted RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 BCL7BQ9BQE9 202 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 ATG101Q9BSB4 218 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 ZNF416Q9BWM5 594 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 C1QTNF7Q9BXJ2 289 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 DDX47Q9H0S4 455 aaKnown RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 WDR6Q9NNW5 1121 aaKnown RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 MKKSQ9NPJ1 570 aaPredicted RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 TCP11L1Q9NUJ3 509 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 ASNSD1Q9NWL6 643 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 SYBUQ9NX95 663 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 DLL3Q9NYJ7 618 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 TFCP2L1Q9NZI6 479 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 CNOT2Q9NZN8 540 aaKnown RBP3.29□□□□□ -1.88
PRPF4-203ENST00000488937 FBXO4Q9UKT5 387 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 CDC14AQ9UNH5 594 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 ENTPD4Q9Y227 616 aa3.29□□□□□ -1.88
PRPF4-203ENST00000488937 ADGRA2Q96PE1 1338 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 KAT6AQ92794 2004 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 C15orf38-AP3S2A0A0A6YYH1 394 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 A0A0U1RQS6 177 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ILVBLA1L0T0 632 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 MACROD2A1Z1Q3 448 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 DNAJC9-AS1A6NH13 148 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ZNF716A6NP11 495 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ERVV-2B6SEH9 535 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 H0Y8G0 127 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 VCYO14598 125 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 XPO1O14980 1071 aaKnown RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 SMAD6O43541 496 aaKnown RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 TLX2O43763 284 aaPredicted RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 SPOPO43791 374 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 KIF1CO43896 1103 aaKnown RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 OR10H2O60403 315 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ATP9AO75110 1047 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ECI2O75521 394 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 CSDE1O75534 798 aaKnown RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 TOM1L1O75674 476 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 RHOBTB1O94844 696 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 NDUFA10O95299 355 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 CH25HO95992 272 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 CSN3P07498 182 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 MMP10P09238 476 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 RHOXF2BP0C7M4 288 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 ZNF735P0CB33 412 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 CSF2RAP15509 400 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 DDX5P17844 614 aaKnown RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 UGT1A6P19224 532 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 DRD5P21918 477 aa3.28□□□□□ -1.88
PRPF4-203ENST00000488937 UBA1P22314 1058 aaKnown RBP3.28□□□□□ -1.88
PRPF4-203ENST00000488937 AZGP1P25311 298 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms