RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 AP2A2O94973 939 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 AP2A1O95782 977 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 GOT2P00505 430 aaKnown RBP15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 ALAS2P22557 587 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 MCM3P25205 808 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 NSG1P42857 185 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 RPA4Q13156 261 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 SHISA6Q6ZSJ9 500 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 MED25Q71SY5 747 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 RAB43Q86YS6 212 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 TMTC1Q8IUR5 882 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 SPNS2Q8IVW8 549 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 KRT222Q8N1A0 295 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 METTL27Q8N6F8 245 aaPredicted RBP15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 TMEM102Q8N9M5 508 aaPredicted RBP15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 DNAAF3Q8N9W5 541 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 GLIS1Q8NBF1 620 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 OR13J1Q8NGT2 312 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 SLC35B2Q8TB61 432 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 SNRNP40Q96DI7 357 aaKnown RBP15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 GBP5Q96PP8 586 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 ETNK1Q9HBU6 452 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 SYTL2Q9HCH5 934 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 SLC22A11Q9NSA0 550 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 ASF1BQ9NVP2 202 aa15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 IFT80Q9P2H3 777 aaPredicted RBP15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 GPN3Q9UHW5 284 aaPredicted RBP15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 FEZ2Q9UHY8 353 aaPredicted RBP15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 TSR3Q9UJK0 312 aaKnown RBP15.32■□□□□ 0.04
ERGIC3-217ENST00000488935 CNTRLQ7Z7A1 2325 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 LIN7AO14910 233 aaPredicted RBP15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 UMODP07911 640 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 MAGP20916 626 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 CCR7P32248 378 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 SHMT2P34897 504 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 FOLR3P41439 243 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 DCDP81605 110 aaKnown RBP15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 HSPA14Q0VDF9 509 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 KLF1Q13351 362 aaPredicted RBP15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 SNX1Q13596 522 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 NR6A1Q15406 480 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 PPP1R32Q7Z5V6 425 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 TBC1D21Q8IYX1 336 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 DNAJC22Q8N4W6 341 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 LINC01555Q8NAE3 123 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 OR5K2Q8NHB8 316 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 SSC4DQ8WTU2 575 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 C1orf54Q8WWF1 131 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 INPP5DQ92835 1189 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 TCTN2Q96GX1 697 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 SMAD5Q99717 465 aaKnown RBP15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 MESP1Q9BRJ9 268 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 P4HTMQ9NXG6 502 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 STOX2Q9P2F5 926 aaPredicted RBP15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 NDOR1Q9UHB4 597 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 CSAG2Q9Y5P2 127 aa15.31■□□□□ 0.04
ERGIC3-217ENST00000488935 GOLGA6L9A6NEM1 432 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 ZSCAN9O15535 394 aaPredicted RBP15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 IFNB1P01574 187 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 FTH1P02794 183 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 MSL3P1P0C860 447 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 ITGAXP20702 1163 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 RRADP55042 308 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 ITIH4Q14624 930 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 SSPNQ14714 243 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 NKAIN1Q4KMZ8 207 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 RHBDD2Q6NTF9 364 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 ZNF534Q76KX8 674 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 OR6P1Q8NGX9 317 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 PNPLA2Q96AD5 504 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 LRRC45Q96CN5 670 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 RANBP9Q96S59 729 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 ZNF552Q9H707 407 aaPredicted RBP15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 TXLNGQ9NUQ3 528 aa15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 MARCH4Q9P2E8 410 aaPredicted RBP15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 RUVBL2Q9Y230 463 aaKnown RBP15.3■□□□□ 0.04
ERGIC3-217ENST00000488935 NOTCH2Q04721 2471 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 BTNL10A8MVZ5 291 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 NRP2O60462 931 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 IPO7O95373 1038 aaKnown RBP15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 HBQ1P09105 142 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 OR56A5P0C7T3 313 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 ZSCAN5DPP0CG00 497 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 CCSMST1Q4G0I0 132 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 DCAF10Q5QP82 559 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 TSTD2Q5T7W7 516 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 ZNF787Q6DD87 383 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 PPP1R21Q6ZMI0 780 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 TTLL10Q6ZVT0 673 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 MCATQ8IVS2 390 aaKnown RBP15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 GALNT16Q8N428 558 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 UBL4BQ8N7F7 174 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 TTC13Q8NBP0 860 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 PPP1R2P1Q96PQ5 205 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 EURLQ9NYK6 297 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 G3BP2Q9UN86 482 aaKnown RBP15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 NTNG1Q9Y2I2 539 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 PADI2Q9Y2J8 665 aa15.29■□□□□ 0.04
ERGIC3-217ENST00000488935 CAPN6Q9Y6Q1 641 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms