RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 CCDC34Q96HJ3 373 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 PPM1MQ96MI6 270 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 SRSF8Q9BRL6 282 aaKnown RBP3.25□□□□□ -1.89
CCDC66-221ENST00000487739 RPP25Q9BUL9 199 aaKnown RBP3.25□□□□□ -1.89
CCDC66-221ENST00000487739 FNDC11Q9BVV2 318 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 PPANQ9NQ55 473 aaKnown RBP3.25□□□□□ -1.89
CCDC66-221ENST00000487739 P4HTMQ9NXG6 502 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 SPHK1Q9NYA1 384 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 ORC3Q9UBD5 711 aaPredicted RBP3.25□□□□□ -1.89
CCDC66-221ENST00000487739 TUBE1Q9UJT0 475 aa3.25□□□□□ -1.89
CCDC66-221ENST00000487739 LRRC72A6NJI9 287 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 BCL2L11O43521 198 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 MITFO75030 526 aaPredicted RBP3.24□□□□□ -1.89
CCDC66-221ENST00000487739 TBX18O95935 607 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 SCGB1D1O95968 90 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 KRTAP1-4P0C5Y4 121 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 MMP9P14780 707 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 MAMLD1Q13495 774 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 SQLEQ14534 574 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 GORABQ5T7V8 394 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 TMCO3Q6UWJ1 677 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 BTN2A1Q7KYR7 527 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 TMEM139Q8IV31 216 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 WDTC1Q8N5D0 677 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 C17orf47Q8NEP4 570 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 OR5M8Q8NGP6 311 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 OR2AJ1Q8NGZ0 328 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 OR52N5Q8NH56 324 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 MAPK15Q8TD08 544 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 MIPOL1Q8TD10 442 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 URM1Q9BTM9 101 aaKnown RBP3.24□□□□□ -1.89
CCDC66-221ENST00000487739 DPAGT1Q9H3H5 408 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 HRH4Q9H3N8 390 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 UNC45AQ9H3U1 944 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 MAN2C1Q9NTJ4 1040 aa3.24□□□□□ -1.89
CCDC66-221ENST00000487739 ZHX1Q9UKY1 873 aaPredicted RBP3.24□□□□□ -1.89
CCDC66-221ENST00000487739 XRCC3O43542 346 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 AVILO75366 819 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 WDPCPO95876 746 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 IGKV3-15P01624 115 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 ITIH1P19827 911 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 RPL21P46778 160 aaKnown RBP3.23□□□□□ -1.89
CCDC66-221ENST00000487739 MAZP56270 477 aaKnown RBP3.23□□□□□ -1.89
CCDC66-221ENST00000487739 GUCY2DQ02846 1103 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 LY6DQ14210 128 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 MTHFSDQ2M296 383 aaKnown RBP3.23□□□□□ -1.89
CCDC66-221ENST00000487739 SLC25A53Q5H9E4 307 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 ELFN2Q5R3F8 820 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 SNX30Q5VWJ9 437 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 SLC25A47Q6Q0C1 308 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 TMEM207Q6UWW9 146 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 HAUS6Q7Z4H7 955 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 TBC1D1Q86TI0 1168 aaPredicted RBP3.23□□□□□ -1.89
CCDC66-221ENST00000487739 ZNF584Q8IVC4 421 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 CDK20Q8IZL9 346 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 NUP37Q8NFH4 326 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 OR13C3Q8NGS6 347 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 ZNF486Q96H40 463 aaPredicted RBP3.23□□□□□ -1.89
CCDC66-221ENST00000487739 ITPAQ9BY32 194 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 PPIL3Q9H2H8 161 aaKnown RBP3.23□□□□□ -1.89
CCDC66-221ENST00000487739 MYH16Q9H6N6 1097 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 MED20Q9H944 212 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 LARSQ9P2J5 1176 aaKnown RBP3.23□□□□□ -1.89
CCDC66-221ENST00000487739 HACL1Q9UJ83 578 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 PPP2R2CQ9Y2T4 447 aa3.23□□□□□ -1.89
CCDC66-221ENST00000487739 LNP1A1A4G5 178 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 HEPACAM2A8MVW5 462 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 KLLNB2CW77 178 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 B4E171 279 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 EPHB6O15197 1021 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 NPHP1O15259 732 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 GLRA3O75311 464 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 CREG1O75629 220 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 SEC24AO95486 1093 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 HPRP00739 348 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 VTNP04004 478 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 LHCGRP22888 699 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 CDC25CP30307 473 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 TSPAN7P41732 249 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 SUOXP51687 545 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 ARSEP51690 589 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 TMF1P82094 1093 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 CDK3Q00526 305 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 TNIP1Q15025 636 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 HIGD2BQ4VC39 106 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 PHLDA2Q53GA4 152 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 MMS22LQ6ZRQ5 1243 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 RTN4RL2Q86UN3 420 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 C11orf53Q8IXP5 236 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 EID3Q8N140 333 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 ARHGAP24Q8N264 748 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 NPEPL1Q8NDH3 523 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 ZPLD1Q8TCW7 415 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 UCMAQ8WVF2 138 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 USP6NLQ92738 828 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 LRRC59Q96AG4 307 aaKnown RBP3.22□□□□□ -1.89
CCDC66-221ENST00000487739 C10orf90Q96M02 699 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 NEK1Q96PY6 1258 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 PUS3Q9BZE2 481 aaKnown RBP3.22□□□□□ -1.89
CCDC66-221ENST00000487739 OR2B2Q9GZK3 357 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms