RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 MRPL19P49406 292 aaKnown RBP9.19□□□□□ -0.94
SF3B1-211ENST00000487698 DGKEP52429 567 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 KIAA1024LP59773 190 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 ELF3P78545 371 aaPredicted RBP9.19□□□□□ -0.94
SF3B1-211ENST00000487698 TFF2Q03403 129 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 PCDH1Q08174 1060 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 PRAMEF9Q5VWM5 478 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 AGTRAPQ6RW13 159 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 Q6ZSR9 355 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 SNX32Q86XE0 403 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 HOMEZQ8IX15 550 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 C10orf67Q8IYJ2 551 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 L3MBTL4Q8NA19 623 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 OR56A3Q8NH54 315 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 HMGB4Q8WW32 186 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 SCARF2Q96GP6 870 aaPredicted RBP9.19□□□□□ -0.94
SF3B1-211ENST00000487698 TIMM29Q9BSF4 260 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 BTBD1Q9H0C5 482 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 ATG10Q9H0Y0 220 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 SGK2Q9HBY8 427 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 POLMQ9NP87 494 aaPredicted RBP9.19□□□□□ -0.94
SF3B1-211ENST00000487698 CA14Q9ULX7 337 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 SLC22A14Q9Y267 594 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 RNF11Q9Y3C5 154 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 CCL27Q9Y4X3 112 aa9.19□□□□□ -0.94
SF3B1-211ENST00000487698 LOC100653049A0A140TA62 436 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 LRRC72A6NJI9 287 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 KRT34O76011 436 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 CLDN9O95484 217 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 ITPKAP23677 461 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 HMOX2P30519 316 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 ACADVLP49748 655 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 IRX1P78414 480 aaPredicted RBP9.18□□□□□ -0.94
SF3B1-211ENST00000487698 FZD5Q13467 585 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 ABRAXAS2Q15018 415 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 HABP4Q5JVS0 413 aaKnown RBP9.18□□□□□ -0.94
SF3B1-211ENST00000487698 TMEM31Q5JXX7 168 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 PRPF38BQ5VTL8 546 aaKnown RBP9.18□□□□□ -0.94
SF3B1-211ENST00000487698 IL27RAQ6UWB1 636 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 LONP2Q86WA8 852 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 DEFB123Q8N688 67 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 SNX31Q8N9S9 440 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 SPDYE1Q8NFV5 336 aaPredicted RBP9.18□□□□□ -0.94
SF3B1-211ENST00000487698 ZNF480Q8WV37 535 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 USP7Q93009 1102 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 OR4K3Q96R72 315 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 UHRF1Q96T88 793 aaPredicted RBP9.18□□□□□ -0.94
SF3B1-211ENST00000487698 RTKNQ9BST9 563 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 MMADHCQ9H3L0 296 aaPredicted RBP9.18□□□□□ -0.94
SF3B1-211ENST00000487698 SDR39U1Q9NRG7 319 aaPredicted RBP9.18□□□□□ -0.94
SF3B1-211ENST00000487698 INTS7Q9NVH2 962 aaKnown RBP9.18□□□□□ -0.94
SF3B1-211ENST00000487698 RIC8BQ9NVN3 520 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 C2orf42Q9NWW7 574 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 PLXND1Q9Y4D7 1925 aa9.18□□□□□ -0.94
SF3B1-211ENST00000487698 KRBA1A5PL33 1030 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 POM121BA6NF01 834 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 PSMD12O00232 456 aaPredicted RBP9.17□□□□□ -0.94
SF3B1-211ENST00000487698 CACNB4O00305 520 aaPredicted RBP9.17□□□□□ -0.94
SF3B1-211ENST00000487698 MANBAO00462 879 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 LSM1O15116 133 aaKnown RBP9.17□□□□□ -0.94
SF3B1-211ENST00000487698 MGRN1O60291 552 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 WFS1O76024 890 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 GPX3P22352 226 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 CYLC2Q14093 348 aaPredicted RBP9.17□□□□□ -0.94
SF3B1-211ENST00000487698 E2F2Q14209 437 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 FASTKQ14296 549 aaKnown RBP9.17□□□□□ -0.94
SF3B1-211ENST00000487698 LRRC32Q14392 662 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 GAS6Q14393 721 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 DNAL1Q4LDG9 190 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 PYCR3Q53H96 274 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 C6orf136Q5SQH8 315 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 CYB5D1Q6P9G0 228 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 SCIMPQ6UWF3 145 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 TRIM46Q7Z4K8 759 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 SPATA19Q7Z5L4 167 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 THOC6Q86W42 341 aaKnown RBP9.17□□□□□ -0.94
SF3B1-211ENST00000487698 ADHFE1Q8IWW8 467 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 LRRC56Q8IYG6 542 aaPredicted RBP9.17□□□□□ -0.94
SF3B1-211ENST00000487698 SFRP1Q8N474 314 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 FLCNQ8NFG4 579 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 OR9A1PQ8NGU1 263 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 MYOCQ99972 504 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 BRINP2Q9C0B6 783 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 ACTR8Q9H981 624 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 FGF22Q9HCT0 170 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 AIG1Q9NVV5 245 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 WNT16Q9UBV4 365 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 CIDEBQ9UHD4 219 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 ZNHIT2Q9UHR6 403 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 FANCMQ8IYD8 2048 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 FFAR3O14843 346 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 GPR42O15529 346 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 UGDHO60701 494 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 PEX11AO75192 247 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 SEMA4FO95754 770 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 ACP5P13686 325 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 IDO1P14902 403 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 HNRNPA2B1P22626 353 aaKnown RBP9.17□□□□□ -0.94
SF3B1-211ENST00000487698 STARD6P59095 220 aa9.17□□□□□ -0.94
SF3B1-211ENST00000487698 ERVK-8P63133 956 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms