RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 PAK4O96013 591 aaPredicted RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 ATP5BP06576 529 aaKnown RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 ANXA6P08133 673 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 CHRM5P08912 532 aaPredicted RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 OR52Z1P0C646 297 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 CCDC130P13994 396 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 CREB1P16220 341 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 HTR1EP28566 365 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 AKT2P31751 481 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 PTGER4P35408 488 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 CHKAP35790 457 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 CCL11P51671 97 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 ITGA8P53708 1063 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 PMS2P54278 862 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 MAP3K7CLP57077 242 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 OR1D5P58170 312 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 RBP5P82980 135 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 B4GALNT1Q00973 533 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 PDE1CQ14123 709 aaPredicted RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 MAPRE1Q15691 268 aaKnown RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 IL17AQ16552 155 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 KYAT1Q16773 422 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 PIP5KL1Q5T9C9 394 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 DUS1LQ6P1R4 473 aaKnown RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 FJX1Q86VR8 437 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 PARGQ86W56 976 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 HORMAD1Q86X24 394 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 APCDD1Q8J025 514 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 CPXM2Q8N436 756 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 LRRC52Q8N7C0 313 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 PNLDC1Q8NA58 520 aaKnown RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 ITLN2Q8WWU7 325 aaPredicted RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 ARSGQ96EG1 525 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 TMA16Q96EY4 203 aaKnown RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 ZDHHC12Q96GR4 267 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 HPDLQ96IR7 371 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 FIZ1Q96SL8 496 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 RUFY1Q96T51 708 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 NAP1L4Q99733 375 aaKnown RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 MACROD1Q9BQ69 325 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 FAM213AQ9BRX8 229 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 MED10Q9BTT4 135 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 MMTAG2Q9BU76 263 aaKnown RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 SARGQ9BW04 601 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 ELOVL4Q9GZR5 314 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 APMAPQ9HDC9 416 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 MLXIPLQ9NP71 852 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 MRPL40Q9NQ50 206 aaKnown RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 TLR8Q9NR97 1041 aaKnown RBP4.34□□□□□ -1.71
CNN3-206ENST00000487539 SLC39A1Q9NY26 324 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 NCKIPSDQ9NZQ3 722 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 TMEM9Q9P0T7 183 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 DNAJB11Q9UBS4 358 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 NAALADL1Q9UQQ1 740 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 KIF3AQ9Y496 699 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 FER1L5A0AVI2 2057 aa4.34□□□□□ -1.71
CNN3-206ENST00000487539 EDDM13A0A1B0GTR0 161 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 CGB1A6NKQ9 187 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 A8MVJ9 347 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 A8MXQ7 604 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 GRID2O43424 1007 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 TBL1XO60907 577 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 LATS1O95835 1130 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 CTSLP07711 333 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 CELA2AP08217 269 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 HNRNPA2B1P22626 353 aaKnown RBP4.33□□□□□ -1.72
CNN3-206ENST00000487539 FPR3P25089 353 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 RENBPP51606 427 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 SRSF7Q16629 238 aaKnown RBP eCLIP4.33□□□□□ -1.72
CNN3-206ENST00000487539 AMZ1Q400G9 498 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 MPPE1Q53F39 396 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 RNASE12Q5GAN4 147 aaKnown RBP4.33□□□□□ -1.72
CNN3-206ENST00000487539 NKAIN2Q5VXU1 208 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 ZNF782Q6ZMW2 699 aaPredicted RBP4.33□□□□□ -1.72
CNN3-206ENST00000487539 C11orf96Q7Z7L8 435 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 CHSY1Q86X52 802 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 PHC2Q8IXK0 858 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 NRSN1Q8IZ57 195 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 C4orf32Q8N8J7 132 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 ARL10Q8N8L6 244 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 ADAMTS18Q8TE60 1221 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 INPP5DQ92835 1189 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 RTP4Q96DX8 246 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 VPS50Q96JG6 964 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 HIST1H2AAQ96QV6 131 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 KLF6Q99612 283 aaPredicted RBP4.33□□□□□ -1.72
CNN3-206ENST00000487539 SLC25A23Q9BV35 468 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 B3GNT4Q9C0J1 378 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 SDCBP2Q9H190 292 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 SNX25Q9H3E2 840 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 C17orf75Q9HAS0 396 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 HEYLQ9NQ87 328 aaPredicted RBP4.33□□□□□ -1.72
CNN3-206ENST00000487539 SPASTQ9UBP0 616 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 APOBEC3BQ9UH17 382 aaKnown RBP4.33□□□□□ -1.72
CNN3-206ENST00000487539 STEAP1Q9UHE8 339 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 IPO11Q9UI26 975 aaKnown RBP4.33□□□□□ -1.72
CNN3-206ENST00000487539 GPR34Q9UPC5 381 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 CORO2BQ9UQ03 480 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 SCML2Q9UQR0 700 aa4.33□□□□□ -1.72
CNN3-206ENST00000487539 STYXL1Q9Y6J8 313 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms