RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 HSD17B2P37059 387 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 CSHL1Q14406 222 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 SBSNQ6UWP8 590 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 RBM44Q6ZP01 1051 aaKnown RBP18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 USP53Q70EK8 1073 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 RAB44Q7Z6P3 723 aaPredicted RBP18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 ADAMTSL2Q86TH1 951 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 TMPRSS12Q86WS5 348 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 PLXDC1Q8IUK5 500 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 ADGRF3Q8IZF5 1079 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 OR4D9Q8NGE8 314 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 HMGCLL1Q8TB92 370 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 EPS8L3Q8TE67 593 aaKnown RBP18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 JPH3Q8WXH2 748 aaPredicted RBP18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 NCSTNQ92542 709 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 CCDC138Q96M89 665 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 RDH14Q9HBH5 336 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 NMRAL1Q9HBL8 299 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 HRASLS2Q9NWW9 162 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 CTNNAL1Q9UBT7 734 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 TBK1Q9UHD2 729 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 IKZF3Q9UKT9 509 aa18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 ATXN7L1Q9ULK2 861 aaPredicted RBP18.79■□□□□ 0.6
PCOLCE-208ENST00000487172 OR6C74A6NCV1 312 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 CDC7O00311 574 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 BTN3A3O00478 584 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 KLHL2O95198 593 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 MT-CO3P00414 261 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 LTA4HP09960 611 aaKnown RBP18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 HIST1H2AGP0C0S8 130 aaPredicted RBP18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 COL6A2P12110 1019 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 HIST1H2ADP20671 130 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 CSF2RBP32927 897 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 SLCO1A2P46721 670 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 AP1S2P56377 157 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 DLG1Q12959 904 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 CYP2A13Q16696 494 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 N4BP2L1Q5TBK1 243 aaPredicted RBP18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 ZNF574Q6ZN55 896 aaPredicted RBP18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 CENPLQ8N0S6 344 aaPredicted RBP18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 OR2L8Q8NGY9 312 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 ACMSDQ8TDX5 336 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 DENND1AQ8TEH3 1009 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 KIAA1191Q96A73 305 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 HIST1H2AHQ96KK5 128 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 PKP4Q99569 1192 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 HIST1H2AJQ99878 128 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 NUDT22Q9BRQ3 303 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 H2AFJQ9BTM1 129 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 TRIM54Q9BYV2 358 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 XKR8Q9H6D3 395 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 IGSF5Q9NSI5 407 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 PLAGL1Q9UM63 463 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 CLCA2Q9UQC9 943 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 ENTPD2Q9Y5L3 495 aa18.78■□□□□ 0.6
PCOLCE-208ENST00000487172 MN1Q10571 1320 aaPredicted RBP18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 CNOT1A5YKK6 2376 aaKnown RBP18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 BTN3A1O00481 513 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 HOXB3P14651 431 aaPredicted RBP18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 KCNA4P22459 653 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 CDKL1Q00532 357 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 ZFP36L1Q07352 338 aaKnown RBP18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 PRKAA1Q13131 559 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 PHKG1Q16816 387 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 PPP1R3AQ16821 1122 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 FAM83EQ2M2I3 478 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 HES3Q5TGS1 186 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 ANKS6Q68DC2 871 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 TMPRSS7Q7RTY8 843 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 DGLUCYQ7Z3D6 616 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 TMPRSS9Q7Z410 1059 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 ISCA2Q86U28 154 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 GALNT15Q8N3T1 639 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 SPATA6LQ8N4H0 392 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 DCBLD1Q8N8Z6 715 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 NXNL1Q96CM4 212 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 GRAMD1AQ96CP6 724 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 ZDHHC12Q96GR4 267 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 TMEM74Q96NL1 305 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 DEPDC7Q96QD5 511 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 NRTNQ99748 197 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 VPS11Q9H270 941 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 SYNDIG1Q9H7V2 258 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 LGALS13Q9UHV8 139 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 OARD1Q9Y530 152 aa18.77■□□□□ 0.6
PCOLCE-208ENST00000487172 TLDC2A0PJX2 215 aa18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 NPEPPSL1A6NEC2 478 aa18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 ZNF839A8K0R7 811 aa18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 TMX2-CTNND1H3BSU7 103 aa18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 TOX3O15405 576 aaPredicted RBP18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 CAPN5O15484 640 aaPredicted RBP18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 CHRM5P08912 532 aaPredicted RBP18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 H2AFXP16104 143 aaPredicted RBP18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 POLR2CP19387 275 aaPredicted RBP18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 CCKBRP32239 447 aa18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 GMPRP36959 345 aa18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 PPM1FP49593 454 aaPredicted RBP18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 IRF9Q00978 393 aa18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 TRA2AQ13595 282 aaKnown RBP eCLIP18.76■□□□□ 0.59
PCOLCE-208ENST00000487172 ACAP2Q15057 778 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms