RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CRADDP78560 199 aa23.68■■□□□ 1.38
LIME1-206ENST00000487026 NADK2Q4G0N4 442 aa23.68■■□□□ 1.38
LIME1-206ENST00000487026 MLIPQ5VWP3 458 aa23.68■■□□□ 1.38
LIME1-206ENST00000487026 SLC22A15Q8IZD6 547 aa23.68■■□□□ 1.38
LIME1-206ENST00000487026 CARD6Q9BX69 1037 aa23.68■■□□□ 1.38
LIME1-206ENST00000487026 MLXIPLQ9NP71 852 aa23.68■■□□□ 1.38
LIME1-206ENST00000487026 CATSPERZQ9NTU4 200 aa23.68■■□□□ 1.38
LIME1-206ENST00000487026 PCDHGA9Q9Y5G4 932 aaKnown RBP23.68■■□□□ 1.38
LIME1-206ENST00000487026 DOPEY2Q9Y3R5 2298 aa23.68■■□□□ 1.38
LIME1-206ENST00000487026 C9J4A7 227 aa23.67■■□□□ 1.38
LIME1-206ENST00000487026 ATP1A4Q13733 1029 aa23.67■■□□□ 1.38
LIME1-206ENST00000487026 PCID2Q5JVF3 399 aa23.67■■□□□ 1.38
LIME1-206ENST00000487026 IL17FQ96PD4 163 aa23.67■■□□□ 1.38
LIME1-206ENST00000487026 DPH2Q9BQC3 489 aaPredicted RBP23.67■■□□□ 1.38
LIME1-206ENST00000487026 DHCR7Q9UBM7 475 aaKnown RBP23.67■■□□□ 1.38
LIME1-206ENST00000487026 ANAPC5Q9UJX4 755 aa23.67■■□□□ 1.38
LIME1-206ENST00000487026 TTLL8A6PVC2 850 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 GOLGA6L6A8MZA4 724 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 F8W8V4 182 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 CD3EAPO15446 510 aaKnown RBP23.66■■□□□ 1.38
LIME1-206ENST00000487026 GPC4O75487 556 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 PKLRP30613 574 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 OTX2P32243 289 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 SRSF1Q07955 248 aaKnown RBP eCLIP23.66■■□□□ 1.382e-6■□□□□ 8.6
LIME1-206ENST00000487026 KIR2DS3Q14952 304 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 CCNG2Q16589 344 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 KYNUQ16719 465 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 SLC5A12Q1EHB4 618 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 DNAJC21Q5F1R6 531 aaKnown RBP23.66■■□□□ 1.38
LIME1-206ENST00000487026 TAX1BP1Q86VP1 789 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 DNAJC22Q8N4W6 341 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 ZNF655Q8N720 491 aaPredicted RBP23.66■■□□□ 1.38
LIME1-206ENST00000487026 LINC01555Q8NAE3 123 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 FDCSPQ8NFU4 85 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 ASZ1Q8WWH4 475 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 SGSM3Q96HU1 749 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 LZTFL1Q9NQ48 299 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 IRAK4Q9NWZ3 460 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 AP1M2Q9Y6Q5 423 aa23.66■■□□□ 1.38
LIME1-206ENST00000487026 LRRK2Q5S007 2527 aa23.65■■□□□ 1.38
LIME1-206ENST00000487026 PCSK5Q92824 1860 aa23.65■■□□□ 1.38
LIME1-206ENST00000487026 KLF7O75840 302 aaPredicted RBP23.65■■□□□ 1.38
LIME1-206ENST00000487026 AOAHP28039 575 aa23.65■■□□□ 1.38
LIME1-206ENST00000487026 PPARGP37231 505 aaPredicted RBP23.65■■□□□ 1.38
LIME1-206ENST00000487026 RAB28P51157 221 aa23.65■■□□□ 1.38
LIME1-206ENST00000487026 FOXL2P58012 376 aa23.65■■□□□ 1.38
LIME1-206ENST00000487026 BASP1P80723 227 aaKnown RBP23.65■■□□□ 1.38
LIME1-206ENST00000487026 GRB7Q14451 532 aa23.65■■□□□ 1.38
LIME1-206ENST00000487026 SLC9A5Q14940 896 aa23.65■■□□□ 1.38
LIME1-206ENST00000487026 RHBDD2Q6NTF9 364 aa23.65■■□□□ 1.38
LIME1-206ENST00000487026 TSSK1BQ9BXA7 367 aa23.65■■□□□ 1.38
LIME1-206ENST00000487026 CHRNA10Q9GZZ6 450 aa23.65■■□□□ 1.38
LIME1-206ENST00000487026 DRG1Q9Y295 367 aaKnown RBP23.65■■□□□ 1.38
LIME1-206ENST00000487026 SNRNP200O75643 2136 aaKnown RBP23.65■■□□□ 1.38
LIME1-206ENST00000487026 MAST4O15021 2626 aa23.64■■□□□ 1.38
LIME1-206ENST00000487026 KDM1AO60341 852 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 CEACAM4O75871 244 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 APOA4P06727 396 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 MAGP20916 626 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 NMBRP28336 390 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 KCNJ1P48048 391 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 CD97P48960 835 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 RAPSNQ13702 412 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 AARS2Q5JTZ9 985 aaKnown RBP23.64■■□□□ 1.37
LIME1-206ENST00000487026 PAPD7Q5XG87 772 aaKnown RBP23.64■■□□□ 1.37
LIME1-206ENST00000487026 PTRHD1Q6GMV3 140 aaKnown RBP23.64■■□□□ 1.37
LIME1-206ENST00000487026 GSTA5Q7RTV2 222 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 TMEM151BQ8IW70 566 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 UBE2Q2Q8WVN8 375 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 PEX13Q92968 403 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 COL26A1Q96A83 441 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 GBP5Q96PP8 586 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 MENTQ9BUN1 341 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 NUDT9Q9BW91 350 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 ANKMY1Q9P2S6 941 aa23.64■■□□□ 1.37
LIME1-206ENST00000487026 GPN3Q9UHW5 284 aaPredicted RBP23.64■■□□□ 1.37
LIME1-206ENST00000487026 FER1L5A0AVI2 2057 aa23.63■■□□□ 1.37
LIME1-206ENST00000487026 PRMT5O14744 637 aaPredicted RBP23.63■■□□□ 1.37
LIME1-206ENST00000487026 ZSCAN9O15535 394 aaPredicted RBP23.63■■□□□ 1.37
LIME1-206ENST00000487026 FGGP02679 453 aa23.63■■□□□ 1.37
LIME1-206ENST00000487026 CD9P21926 228 aa23.63■■□□□ 1.37
LIME1-206ENST00000487026 TERF1P54274 439 aa23.63■■□□□ 1.37
LIME1-206ENST00000487026 DCDP81605 110 aaKnown RBP23.63■■□□□ 1.37
LIME1-206ENST00000487026 CES3Q6UWW8 571 aa23.63■■□□□ 1.37
LIME1-206ENST00000487026 MED25Q71SY5 747 aa23.63■■□□□ 1.37
LIME1-206ENST00000487026 ATCAYQ86WG3 371 aa23.63■■□□□ 1.37
LIME1-206ENST00000487026 TMEM102Q8N9M5 508 aaPredicted RBP23.63■■□□□ 1.37
LIME1-206ENST00000487026 DHRS4Q9BTZ2 278 aa23.63■■□□□ 1.37
LIME1-206ENST00000487026 MFRPQ9BY79 579 aa23.63■■□□□ 1.37
LIME1-206ENST00000487026 TREX1Q9NSU2 369 aa23.63■■□□□ 1.37
LIME1-206ENST00000487026 IFT80Q9P2H3 777 aaPredicted RBP23.63■■□□□ 1.37
LIME1-206ENST00000487026 PLCL2Q9UPR0 1127 aa23.63■■□□□ 1.37
LIME1-206ENST00000487026 PADI2Q9Y2J8 665 aa23.63■■□□□ 1.37
LIME1-206ENST00000487026 PTRH2Q9Y3E5 179 aaKnown RBP23.63■■□□□ 1.37
LIME1-206ENST00000487026 CCDC88CQ9P219 2028 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 CLEC18AA5D8T8 446 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 CNOT3O75175 753 aaKnown RBP23.62■■□□□ 1.37
LIME1-206ENST00000487026 SLCO2B1O94956 709 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 GRIA3P42263 894 aa23.62■■□□□ 1.37
LIME1-206ENST00000487026 TTPAP49638 278 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms