RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 BEND5Q7L4P6 421 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 GPC2Q8N158 579 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 SCAIQ8N9R8 606 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 PAPD5Q8NDF8 572 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 LKAAEAR1Q8TD35 194 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 ABHD16BQ9H3Z7 469 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 DSN1Q9H410 356 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 FAM124BQ9H5Z6 455 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 ERVK13-1Q9NX77 482 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 QPCTLQ9NXS2 382 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 MARCH2Q9P0N8 246 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 HCSTQ9UBK5 93 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 ZNF639Q9UID6 485 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 AGO1Q9UL18 857 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 LCHNA4D1U4 455 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 NT5C1B-RDH14C9J2C7 533 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 KCNK2O95069 426 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 ALDH7A1P49419 539 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 ST13P50502 369 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 DAPP51397 102 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 BRMS1LQ5PSV4 323 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 PTRHD1Q6GMV3 140 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 PDE12Q6L8Q7 609 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 NLGN4XQ8N0W4 816 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 CD200R1Q8TD46 325 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 ATL1Q8WXF7 558 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 MAL2Q969L2 176 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 ISG20Q96AZ6 181 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 NECTIN4Q96NY8 510 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 CIPCQ9C0C6 399 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 TPK1Q9H3S4 243 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 ARNT2Q9HBZ2 717 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 MRGBPQ9NV56 204 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 WWOXQ9NZC7 414 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 SNX6Q9UNH7 406 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 SAMHD1Q9Y3Z3 626 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 PNMA8CA0A1B0GUJ8 204 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 LOC730098B7Z3J9 87 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 CXCL11O14625 94 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 RAD51BO15315 384 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 RGS5O15539 181 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 TSPAN12O95859 305 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 F2P00734 622 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 SLC10A3P09131 477 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 GADD45AP24522 165 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 THPOP40225 353 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 TGM4P49221 684 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 CRYBB1P53674 252 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 TAF10Q12962 218 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 ARTNQ5T4W7 220 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 ATXN7L2Q5T6C5 722 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 FAM180BQ6P0A1 224 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 AKAP14Q86UN6 197 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 RGL4Q8IZJ4 473 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 TTC29Q8NA56 475 aaPredicted RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 OR6Q1Q8NGQ2 317 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 UTP15Q8TED0 518 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 FBXO32Q969P5 355 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 REXO5Q96IC2 774 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 WDR12Q9GZL7 423 aaKnown RBP12.12□□□□□ -0.47
HSPG2-211ENST00000486901 DERL2Q9GZP9 239 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 SLC6A14Q9UN76 642 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 NEUROG3Q9Y4Z2 214 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 PCDHB9Q9Y5E1 797 aa12.12□□□□□ -0.47
HSPG2-211ENST00000486901 PLXNA1Q9UIW2 1896 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 M0QZ92 97 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 JUNBP17275 347 aaPredicted RBP12.11□□□□□ -0.47
HSPG2-211ENST00000486901 GRK5P34947 590 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 KRT20P35900 424 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 GBX1Q14549 363 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 TAB1Q15750 504 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 HIST2H2ACQ16777 129 aaPredicted RBP12.11□□□□□ -0.47
HSPG2-211ENST00000486901 RUNDC3AQ59EK9 446 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 OR4F3Q6IEY1 312 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 ZNF621Q6ZSS3 439 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 ADHFE1Q8IWW8 467 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 COLGALT2Q8IYK4 626 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 TMEM86AQ8N2M4 240 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 SERPINB11Q96P15 392 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 MAF1Q9H063 256 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 OR51E2Q9H255 320 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 TRIT1Q9H3H1 467 aaKnown RBP12.11□□□□□ -0.47
HSPG2-211ENST00000486901 CSNK1G1Q9HCP0 422 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 SIRT5Q9NXA8 310 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 TTC34A8MYJ7 566 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 AREL1O15033 823 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 IGLV3-25P01717 112 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 NUDT7P0C024 238 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 VLDLRP98155 873 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 FOXM1Q08050 763 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 ZNF691Q5VV52 312 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 RHEBL1Q8TAI7 183 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 ASB2Q96Q27 587 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 ADAM2Q99965 735 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 CINPQ9BW66 212 aaPredicted RBP12.11□□□□□ -0.47
HSPG2-211ENST00000486901 RRAGCQ9HB90 399 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 ATP13A1Q9HD20 1204 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 EXOSC4Q9NPD3 245 aaKnown RBP12.11□□□□□ -0.47
HSPG2-211ENST00000486901 GKN1Q9NS71 199 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 ELOVL2Q9NXB9 296 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms