RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PDYNP01213 254 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 BCKDHAP12694 445 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 ITGB8P26012 769 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 RPL10P27635 214 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 CHRNB3Q05901 458 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 HSPA14Q0VDF9 509 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 RUNDC3AQ59EK9 446 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 ABRAXAS1Q6UWZ7 409 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 TMEM25Q86YD3 366 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 OR10A6Q8NH74 314 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 ASB11Q8WXH4 323 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 FIG4Q92562 907 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 OR52E6Q96RD3 313 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 UGT2B28Q9BY64 529 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 CCL26Q9Y258 94 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 HELZP42694 1942 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 KCNE1BA0A087WTH5 132 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 SNAP29O95721 258 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 CLIC3O95833 236 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 TIMP1P01033 207 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 HIST1H2AGP0C0S8 130 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 ATP1B2P14415 290 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 HIST1H2ADP20671 130 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 SLC5A2P31639 672 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 HNMTP50135 292 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 CDK9P50750 372 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 RPS14P62263 151 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 ADARB1P78563 741 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 ZXDCQ2QGD7 858 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 USP51Q70EK9 711 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 DET1Q7L5Y6 550 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 KREMEN2Q8NCW0 462 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 DNAJB8Q8NHS0 232 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 ADAMTS16Q8TE57 1224 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 SELENOMQ8WWX9 145 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 HIST1H2AHQ96KK5 128 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 HIST1H2AJQ99878 128 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 H2AFJQ9BTM1 129 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 IKZF5Q9H5V7 419 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 PKD2L2Q9NZM6 624 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 SLCO3A1Q9UIG8 710 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 MBD1Q9UIS9 605 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 SNX6Q9UNH7 406 aa17.55■□□□□ 0.4
PDLIM7-207ENST00000486828 CEP290O15078 2479 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 TRBV5-3A0A0A0MS03 114 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 SLC16A5O15375 505 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 SEC24DO94855 1032 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 PRPH2P23942 346 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 SLC6A12P48065 614 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 CLDN8P56748 225 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 SP140Q13342 867 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 TMEM259Q4ZIN3 620 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 LRRC73Q5JTD7 316 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 PLEKHS1Q5SXH7 462 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 TMEM214Q6NUQ4 689 aaKnown RBP17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 Q6ZVU0 165 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 CHST14Q8NCH0 376 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 OR52E4Q8NGH9 312 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 CLHC1Q8NHS4 586 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 SLC22A17Q8WUG5 538 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 PCDHGA11Q9Y5H2 935 aa17.54■□□□□ 0.4
PDLIM7-207ENST00000486828 ALPK3Q96L96 1907 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 ELOVL7A1L3X0 281 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 PABPN1LA6NDY0 278 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 NEDD8-MDP1E9PL57 170 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 H0YAE9 185 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 AREL1O15033 823 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 EFCAB14O75071 495 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 ASLP04424 464 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 ADH1AP07327 375 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 PRPS2P11908 318 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 PABPC1P11940 636 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 CCR2P41597 374 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 POLR2LP62875 67 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 C11orf91Q3C1V1 193 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 GDPD4Q6W3E5 623 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 DNAJC14Q6Y2X3 702 aaPredicted RBP17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 VRK3Q8IV63 474 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 OFCC1Q8IZS5 231 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 L3MBTL4Q8NA19 623 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 SKA2Q8WVK7 121 aaPredicted RBP17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 TMBIM1Q969X1 311 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 HIC2Q96JB3 615 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 PAIP1Q9H074 479 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 ELOVL6Q9H5J4 265 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 CARS2Q9HA77 564 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 ADGRE2Q9UHX3 823 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 CD84Q9UIB8 345 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 DLGAP4Q9Y2H0 992 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 WASH3PC4AMC7 463 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 GFYI3L273 518 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 CCL16O15467 120 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 ERN1O75460 977 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 SCELO95171 688 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 CXCL14O95715 111 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 CSF2RAP15509 400 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 PCSK6P29122 969 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 ALDH3A2P51648 485 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 ARSFP54793 590 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 BOP1Q14137 746 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms