RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ZNF517Q6ZMY9 492 aaPredicted RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 USP53Q70EK8 1073 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 CYS1Q717R9 158 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 GSTA5Q7RTV2 222 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 PDZD3Q86UT5 571 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 LRRC6Q86X45 466 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 CILP2Q8IUL8 1156 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 LMNTD2Q8IXW0 634 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 KRT222Q8N1A0 295 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 FBXO39Q8N4B4 442 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 AMER2Q8N7J2 671 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 SPATA4Q8NEY3 305 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 PPHLN1Q8NEY8 458 aaKnown RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 OR10G6Q8NH81 332 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 LPGAT1Q92604 370 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 ANP32BQ92688 251 aaKnown RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 CAPZA3Q96KX2 299 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 C9orf72Q96LT7 481 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 CCDC74BQ96LY2 380 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 DMRTB1Q96MA1 342 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 TTC25Q96NG3 672 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 RUNDC3BQ96NL0 473 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 RUFY1Q96T51 708 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 SLC38A3Q99624 504 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 DDA1Q9BW61 102 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 PITPNM3Q9BZ71 974 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 WWP1Q9H0M0 922 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 ZNF768Q9H5H4 540 aaKnown RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 MVB12BQ9H7P6 319 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 LRRC4CQ9HCJ2 640 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 SMYD2Q9NRG4 433 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 OCIAD1Q9NX40 245 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 KCNK4Q9NYG8 393 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 KLHL42Q9P2K6 505 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 CIDEBQ9UHD4 219 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 PSMD13Q9UNM6 376 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 TMEM184BQ9Y519 407 aaPredicted RBP5.56□□□□□ -1.52
CUX1-208ENST00000485792 KLK4Q9Y5K2 254 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 TEX264Q9Y6I9 313 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 EML6Q6ZMW3 1958 aa5.56□□□□□ -1.52
CUX1-208ENST00000485792 SPTA1P02549 2419 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 GOLGA6L10A0A0M3HER8 536 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 TEX51A0A1B0GUA7 166 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 OR5K3A6NET4 321 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 GOLGA8MH3BSY2 632 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 TTI1O43156 1089 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 OIP5O43482 229 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 DUX1O43812 170 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 SNX2O60749 519 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 TNFRSF21O75509 655 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 UBXN7O94888 489 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 VAPBO95292 243 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 MED26O95402 600 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 DLGAP3O95886 979 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 ESR1P03372 595 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 ERGP11308 486 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 FGF5P12034 268 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 ZNF28P17035 718 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 NELFEP18615 380 aaKnown RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 CD82P27701 267 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 ATP5DP30049 168 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 SLC5A2P31639 672 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 AKT1P31749 480 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 SOX18P35713 384 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 PPARGP37231 505 aaPredicted RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 ADH7P40394 386 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 RPL21P46778 160 aaKnown RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 GABRA4P48169 554 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 CLCN7P51798 805 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 SESN2P58004 480 aaPredicted RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 SARNPP82979 210 aaKnown RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 MPP1Q00013 466 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 GUCY2DQ02846 1103 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 TLE3Q04726 772 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 ZIC1Q15915 447 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 FASTKD1Q53R41 847 aaKnown RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 AARS2Q5JTZ9 985 aaKnown RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 PRAMEF17Q5VTA0 474 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 DUPD1Q68J44 220 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 NEPROQ6NW34 567 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 TIPARPQ7Z3E1 657 aaKnown RBP5.55□□□□□ -1.52
CUX1-208ENST00000485792 PCGF5Q86SE9 256 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 KMT5CQ86Y97 462 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 JAMLQ86YT9 394 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 PLXDC1Q8IUK5 500 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 DENND6AQ8IWF6 608 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 FAM20CQ8IXL6 584 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 CFAP206Q8IYR0 622 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 TBC1D21Q8IYX1 336 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 ADGRF3Q8IZF5 1079 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 D2HGDHQ8N465 521 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 DTWD1Q8N5C7 304 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 LINC01555Q8NAE3 123 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 AGBL5Q8NDL9 886 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 ZNF248Q8NDW4 579 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 OR5K2Q8NHB8 316 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 GDAP1Q8TB36 358 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 HMGCLL1Q8TB92 370 aa5.55□□□□□ -1.52
CUX1-208ENST00000485792 DENND1AQ8TEH3 1009 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms