RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 RPL21P46778 160 aaKnown RBP12.11□□□□□ -0.47
PTCD1-205ENST00000485746 RAB28P51157 221 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 MPP1Q00013 466 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 RHDQ02161 417 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 ABHD18Q0P651 414 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 PDIA2Q13087 525 aaKnown RBP12.11□□□□□ -0.47
PTCD1-205ENST00000485746 KIR2DS3Q14952 304 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.11□□□□□ -0.47
PTCD1-205ENST00000485746 UGT3A1Q6NUS8 523 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 TRIM73Q86UV7 250 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 UNC5BQ8IZJ1 945 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 OR8K5Q8NH50 307 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 SLC22A18Q96BI1 424 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 IL17FQ96PD4 163 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 ERP44Q9BS26 406 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 SYTL2Q9HCH5 934 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 SPHK1Q9NYA1 384 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 GALPQ9UBC7 116 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 SERTAD3Q9UJW9 196 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 RUVBL2Q9Y230 463 aaKnown RBP12.11□□□□□ -0.47
PTCD1-205ENST00000485746 BTRCQ9Y297 605 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 NFS1Q9Y697 457 aa12.11□□□□□ -0.47
PTCD1-205ENST00000485746 KIF26BQ2KJY2 2108 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 A0A0J9YY10 115 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 LOC101059948A0A1B0GTJ6 334 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 TMEM150CB9EJG8 249 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 RASGRF2O14827 1237 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 RAD51CO43502 376 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 KATNA1O75449 491 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 SCRG1O75711 98 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 C1orf105O95561 183 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 DLGAP3O95886 979 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 NTRK1P04629 796 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 LIFP15018 202 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 CYP2A7P20853 494 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 ATP5DP30049 168 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 TSTA3Q13630 321 aaPredicted RBP12.1□□□□□ -0.47
PTCD1-205ENST00000485746 MAP7Q14244 749 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 SF1Q15637 639 aaKnown RBP12.1□□□□□ -0.47
PTCD1-205ENST00000485746 KLHL38Q2WGJ6 581 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 ACSBG2Q5FVE4 666 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 KIAA1614Q5VZ46 1190 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 PWWP2BQ6NUJ5 590 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 TIPARPQ7Z3E1 657 aaKnown RBP12.1□□□□□ -0.47
PTCD1-205ENST00000485746 IGDCC3Q8IVU1 814 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 PALM2Q8IXS6 379 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 GPR135Q8IZ08 494 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 C19orf47Q8N9M1 422 aaKnown RBP12.1□□□□□ -0.47
PTCD1-205ENST00000485746 C2CD4AQ8NCU7 369 aaPredicted RBP12.1□□□□□ -0.47
PTCD1-205ENST00000485746 FBXO36Q8NEA4 188 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 INPP5DQ92835 1189 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 CERS2Q96G23 380 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 TCTN2Q96GX1 697 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 FCRL4Q96PJ5 515 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 TRAPPC9Q96Q05 1148 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 OR2A14Q96R47 310 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 GPR21Q99679 349 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 ARHGAP9Q9BRR9 750 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 AARSD1Q9BTE6 412 aaKnown RBP12.1□□□□□ -0.47
PTCD1-205ENST00000485746 RAB17Q9H0T7 212 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 LATS2Q9NRM7 1088 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 FAM114A2Q9NRY5 505 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 INTS7Q9NVH2 962 aaKnown RBP12.1□□□□□ -0.47
PTCD1-205ENST00000485746 TRMT6Q9UJA5 497 aaKnown RBP12.1□□□□□ -0.47
PTCD1-205ENST00000485746 PADI1Q9ULC6 663 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 FREM2Q5SZK8 3169 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 DMXL2Q8TDJ6 3036 aa12.1□□□□□ -0.47
PTCD1-205ENST00000485746 ZNF891A8MT65 544 aaPredicted RBP12.09□□□□□ -0.47
PTCD1-205ENST00000485746 SYF2O95926 243 aaKnown RBP12.09□□□□□ -0.47
PTCD1-205ENST00000485746 CATP04040 527 aaKnown RBP12.09□□□□□ -0.47
PTCD1-205ENST00000485746 TPBGLP0DKB5 382 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 CD9P21926 228 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 DLSTP36957 453 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 RGS4P49798 205 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 CUL1Q13616 776 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 SLC5A12Q1EHB4 618 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 ZBED8Q8IZ13 594 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 GPATCH11Q8N954 259 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 LMNTD1Q8N9Z9 388 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 OR2L8Q8NGY9 312 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 PYROXD1Q8WU10 500 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 KCNJ9Q92806 393 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 NDNQ99608 321 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 SPRY4Q9C004 299 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 TAS2R13Q9NYV9 303 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 WHRNQ9P202 907 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 KLHL42Q9P2K6 505 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 CDC23Q9UJX2 597 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 DHRS7Q9Y394 339 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 PCDHB3Q9Y5E6 796 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 PCDHGA4Q9Y5G9 962 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 TEX264Q9Y6I9 313 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 ADAMTS20P59510 1910 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 CACNA1BQ00975 2339 aa12.09□□□□□ -0.47
PTCD1-205ENST00000485746 APC2O95996 2303 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 PABPN1LA6NDY0 278 aaKnown RBP12.08□□□□□ -0.48
PTCD1-205ENST00000485746 ZNF839A8K0R7 811 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 E7EQ34 232 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 ZBTB14O43829 449 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms